| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1565 |
|---|
| Symbol | |
|---|
| ID | 3760824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 1715415 |
|---|
| End bp | 1716041 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637786301 |
|---|
| Product | electron transport protein SCO1/SenC |
|---|
| Protein accession | YP_391831 |
|---|
| Protein GI | 78485906 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000000402596 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC ATATTTTTTT AATTCTGGTC ACCAGCGTCA TTATTGGATT GAGTATCATT
GTATGGTTAA CACCCCCTTC TCAATTCCTG GTTTCCGGCG ACGCCAAAAT GAAAACCGCC
GCTTTAAGCC AAAAACCCAA AGGCGGTGAC TTCACGTTAA TGTCGTCATC CGGCCCGGTT
TCTTTATCGG ATTACAAAGG CAAGCTGGTA TTGATTTATT TTGGTTATAC ATTTTGCCCG
GATATCTGCC CTACCAATCT TGGCAACTTA GCCATGGCGT ATCAACAGTT AACCCCCAAA
GAACGAGATC AACTCCAAAT CTTATTCATT TCGGTGGATC CCGACCGAGA TACTCCAAAC
AGGTTAAAAC AATATGCCGA TTACTTTAAG AGTGGCATAG TCGGGCTAAC CGGTAAAAAA
ACCATAATTG ATGACATCAC ACATCGTTAC GGCGTGGTTT ATGCCATTCA TCGAGAAAAG
CCCGATGAGA CAACTTATTC CGTTGATCAC TCGGCATTTA CTTATATAAT TAATGCCAAA
GGCGAACTGG TGAAGCAATT GCCTCATGCC ACCAGCCCAG ACATTTTTAC ACAACAAATC
CGTCATTTCA TGACTCAACA CCCATAA
|
|---|
| Protein sequence | MKKHIFLILV TSVIIGLSII VWLTPPSQFL VSGDAKMKTA ALSQKPKGGD FTLMSSSGPV
SLSDYKGKLV LIYFGYTFCP DICPTNLGNL AMAYQQLTPK ERDQLQILFI SVDPDRDTPN
RLKQYADYFK SGIVGLTGKK TIIDDITHRY GVVYAIHREK PDETTYSVDH SAFTYIINAK
GELVKQLPHA TSPDIFTQQI RHFMTQHP
|
|---|
| |