| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1560 |
|---|
| Symbol | |
|---|
| ID | 3760819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1709220 |
|---|
| End bp | 1709804 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637786296 |
|---|
| Product | YgfB and YecA |
|---|
| Protein accession | YP_391826 |
|---|
| Protein GI | 78485901 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3079] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02292] yecA family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.272578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCGT CTGGAATGGA ATTTGATCAA ATAAATGACG CTTTACAAGC GTACCCTGAA
TTGGAATCAC CTTCGTTTTT GCAAGGGATG CTGGTTGGGC TGATGTGTGG TGATACGAAT
TTAAAAGAAA GCGCTTGGAT TAAAAAAATT CTAGAAGAAG CGAATGTGAA GTCTGTGAAA
GAAAGTTTTC TTATCGCGTT GCATGAACTG TATTTAGAAA CGGATAAAAC TCTGAATGGA
TCAGGATTTG AATTGATTCT TTGTTTGCCG GATGAAAATG AAGCTCTGCC TGCACGAGCA
GCTATGTTGG GGCAATGGTG TGAAGGGTTT TTATATGGCA TGGGCTTAGC GGGCCAGTCA
GAACAAAAAT TAACGGGTGA AGTGGCCGAA TTATTCCGTG ATTTTGGGGA CATTGCCCGT
ATTGAAGTGG ATGGGTTAGA AGACGCCAGT GACCAGGAAG AGTCAGACTT CATGCAGTTG
GTTGAGTTTG TCAAAATTGG TGTCTTAACC ATTAATGAAG AGCTGAATCC GGTGGAAGGG
TCTCCTATTA TGATGCAAGA CGCACCAACG GATACCTTGC ATTAA
|
|---|
| Protein sequence | MDSSGMEFDQ INDALQAYPE LESPSFLQGM LVGLMCGDTN LKESAWIKKI LEEANVKSVK
ESFLIALHEL YLETDKTLNG SGFELILCLP DENEALPARA AMLGQWCEGF LYGMGLAGQS
EQKLTGEVAE LFRDFGDIAR IEVDGLEDAS DQEESDFMQL VEFVKIGVLT INEELNPVEG
SPIMMQDAPT DTLH
|
|---|
| |