Gene Tcr_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1556 
Symbol 
ID3760815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1704475 
End bp1705461 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content39% 
IMG OID637786292 
ProductIon transport protein 
Protein accessionYP_391822 
Protein GI78485897 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000506014 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTCA ATATGCGAAG ACTGAATATC AAAGCATTTC TGGGTGTGGA GGGTGTCTCA 
CCTTCAGAGA ATGCGCATGC CATTAAAATT GGGAGTTACC TCTCCTATGC GGTTTTTCTA
GCATTGTTGG TCGTTGTGAT TCAACTGGTG CTGGATTATT CCGATACGAT TCAGGATGGT
TTTTGGGTTT CCGTTTTGGT GTGGTTGGTA TTTACCACCG AGTTGGTGGT AAATTTATGG
TTGGTCGATG ATCGCAAACG CTATCTTAAG CATAACTGGT TAAATGTGTT AATCATTATT
ATTGTATTTC CTTGGTTTAA TTATGGAAGT GAATGGGCGG CGATTTTGCG GGGGTTAAGG
CTTCTTCTCT TTTTAAGAGT GGTGCTGGAT GTTTTTGGTG ATGTGGTCAA TTTGCTGAAA
CAAAATAGTT TTGGGTTGGT TTTAGCGGGC GCTTTCTTTT TCATTATTCT CGCCGGTGCT
ATCTTTTCAG TGATCGAGGA AGTCGATTTT GCGGATGGTG TCTGGTATGC CTTGGTAACC
ATTACCACCG TTGGTTATGG GGATATGGTG CCTTTAACCG GGGAAGGTCG ATTGTTTGGT
GGTGCCTTAA TTATCATTGG GGTGGTGCTG TTCTCATTGG TGATGGCGAA TATTTCGGCT
TTTTTGATTG GTTCAGAGCA GAAAGAAAGA GAAAAAGATA TTCTGAATCA TGTTAAAAAA
ATGCAAGATC ATTTAGACGT TCAAGCCGAA TTGAATGAAA AACGGTTAAC GGAAATTCTG
TCTGAAATGT CATTTAAGGT CGATGATTTA GAAAAAAGAA TGCAAGCATT TCATGTTGAA
AGATTTGATA ATAGCTTGGG GCTTTTGGAT AAAAGAGTTC GTATCGAAAA AGAAGAAATC
CTACAAAAAA TACGGCAAGA GAATGAAGCG GTTTTGTCAG AATTAAGACG TACGATTGCA
AAATTAGAAG ATAATAAAAA AACCTAA
 
Protein sequence
MSFNMRRLNI KAFLGVEGVS PSENAHAIKI GSYLSYAVFL ALLVVVIQLV LDYSDTIQDG 
FWVSVLVWLV FTTELVVNLW LVDDRKRYLK HNWLNVLIII IVFPWFNYGS EWAAILRGLR
LLLFLRVVLD VFGDVVNLLK QNSFGLVLAG AFFFIILAGA IFSVIEEVDF ADGVWYALVT
ITTVGYGDMV PLTGEGRLFG GALIIIGVVL FSLVMANISA FLIGSEQKER EKDILNHVKK
MQDHLDVQAE LNEKRLTEIL SEMSFKVDDL EKRMQAFHVE RFDNSLGLLD KRVRIEKEEI
LQKIRQENEA VLSELRRTIA KLEDNKKT