Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1556 |
Symbol | |
ID | 3760815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1704475 |
End bp | 1705461 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637786292 |
Product | Ion transport protein |
Protein accession | YP_391822 |
Protein GI | 78485897 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000000506014 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTCA ATATGCGAAG ACTGAATATC AAAGCATTTC TGGGTGTGGA GGGTGTCTCA CCTTCAGAGA ATGCGCATGC CATTAAAATT GGGAGTTACC TCTCCTATGC GGTTTTTCTA GCATTGTTGG TCGTTGTGAT TCAACTGGTG CTGGATTATT CCGATACGAT TCAGGATGGT TTTTGGGTTT CCGTTTTGGT GTGGTTGGTA TTTACCACCG AGTTGGTGGT AAATTTATGG TTGGTCGATG ATCGCAAACG CTATCTTAAG CATAACTGGT TAAATGTGTT AATCATTATT ATTGTATTTC CTTGGTTTAA TTATGGAAGT GAATGGGCGG CGATTTTGCG GGGGTTAAGG CTTCTTCTCT TTTTAAGAGT GGTGCTGGAT GTTTTTGGTG ATGTGGTCAA TTTGCTGAAA CAAAATAGTT TTGGGTTGGT TTTAGCGGGC GCTTTCTTTT TCATTATTCT CGCCGGTGCT ATCTTTTCAG TGATCGAGGA AGTCGATTTT GCGGATGGTG TCTGGTATGC CTTGGTAACC ATTACCACCG TTGGTTATGG GGATATGGTG CCTTTAACCG GGGAAGGTCG ATTGTTTGGT GGTGCCTTAA TTATCATTGG GGTGGTGCTG TTCTCATTGG TGATGGCGAA TATTTCGGCT TTTTTGATTG GTTCAGAGCA GAAAGAAAGA GAAAAAGATA TTCTGAATCA TGTTAAAAAA ATGCAAGATC ATTTAGACGT TCAAGCCGAA TTGAATGAAA AACGGTTAAC GGAAATTCTG TCTGAAATGT CATTTAAGGT CGATGATTTA GAAAAAAGAA TGCAAGCATT TCATGTTGAA AGATTTGATA ATAGCTTGGG GCTTTTGGAT AAAAGAGTTC GTATCGAAAA AGAAGAAATC CTACAAAAAA TACGGCAAGA GAATGAAGCG GTTTTGTCAG AATTAAGACG TACGATTGCA AAATTAGAAG ATAATAAAAA AACCTAA
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Protein sequence | MSFNMRRLNI KAFLGVEGVS PSENAHAIKI GSYLSYAVFL ALLVVVIQLV LDYSDTIQDG FWVSVLVWLV FTTELVVNLW LVDDRKRYLK HNWLNVLIII IVFPWFNYGS EWAAILRGLR LLLFLRVVLD VFGDVVNLLK QNSFGLVLAG AFFFIILAGA IFSVIEEVDF ADGVWYALVT ITTVGYGDMV PLTGEGRLFG GALIIIGVVL FSLVMANISA FLIGSEQKER EKDILNHVKK MQDHLDVQAE LNEKRLTEIL SEMSFKVDDL EKRMQAFHVE RFDNSLGLLD KRVRIEKEEI LQKIRQENEA VLSELRRTIA KLEDNKKT
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