Gene Tcr_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1554 
Symbol 
ID3760813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1701834 
End bp1703243 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content44% 
IMG OID637786290 
ProductPhoH-like protein 
Protein accessionYP_391820 
Protein GI78485895 
COG category[T] Signal transduction mechanisms 
COG ID[COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000065778 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACA GCCCAAAAAG ATTATTCATT CTTGACACCA ACGTTTTAAT GCATGACCCA 
ATGGCGCTCT TCAATTTTGA AGAGCATGAT ATATTCATCT CCATGACTGT CCTTGAAGAG
CTTGATGCCG GTAAAAAAGG GATGTCAGAA GTTTCTCGCA ATGTGCGAGA AACAAACCGC
TTGATTGACC AGATCATTAG CAACGCCAGC TTTGAACAAA TTAAATTAGG ATTGGATTTA
GAGCGAATTC ACCCCAACAA AGAGCGAGAA ACCCTTCACT TAGGGAAACT GTTTTTCGAA
ACCGAACCGA TGGTCGCTCA ACTCCCGGAA ACCCTGCCAA GTCACAAAGC AGATAACCAC
ATCCTTCAAA CCGGCTTAGC TCTAAAATTA CAATACCCTA GTCGCAACGT TACTCTAGTG
ACAAAAGACA TCAATATGCG CATCAAATCG TCTACGGTCG GACTCCATTC CGAGGACTAT
TACAATGATC GCGTATTGGA AGATGCAGAC TTATTATTCA GCGGCTGGGA GGTTTTACCC
GAACATTTTT TTGAAGAAAA CTTCAGCAAA ATGAAATCCT GGCAAGAAGA CAACAAGACC
TTCTACGAAC TGGAATTAGA TGAAACGCAT CATTGGTATC CGAATCAATG TCTACTCAGT
GCAAACGAAT CAGGCTTCAG CGCGATTGTT CGTAAAGTGG AACACAACAT TGCCACGTTA
GAATATATGC ACAACTTTGA ACAATCGAAA CGCAGTGTCT GGGGCATCAC CGCTCGCAAC
CAAGAACAAA ACCTGGCGTT AAACTTTCTA ATGGACCCTA ACATTGATTT TGTATCCTTA
CTTGGAACAG CCGGAACGGG GAAAACGCTA TTAGCTTTGG CAGCAGCATT GGAGCAAACC
CTTGACGAAG GCATCTACAA CGAAATCATC ATGACTCGCG CCACCATTCC CATTGGGGAT
GACATCGGAT TCCTACCCGG CACGGAAGAA GAAAAAATGA CACCCTGGAT GGGCGCATTG
ATGGACAACC TGGAAGTTTT AACCCATTCA GATGGGCACG TTACGGACTG GGAAAAAGAA
TCCACCCAAG AATTACTCAA CAAACGCATT AAAATTAAAT CGCTTAACTT TATGCGCGGG
CGTACCTTTC AAAACAAATT CATCATCATT GATGAATCGC AAAACCTGAC ACCTAAACAA
ATGAAAACAT TAATCACCCG CTCAGGTGAA GGCACTAAAA TTGTCTGCCT GGGGAATATC
GGGCAAATTG ACTCTCCCTA CTTAACCGAA ACCACCACAG GACTCACCTA CATTGTAGAT
CGATTCAAAA ACTGGCCTCA CAGTGCTCAC ATCACACTCA GACAAGGGGA GCGCTCCCGC
TTAGCGGAAT TTGCTTCTGA ATCGTTATAA
 
Protein sequence
MTDSPKRLFI LDTNVLMHDP MALFNFEEHD IFISMTVLEE LDAGKKGMSE VSRNVRETNR 
LIDQIISNAS FEQIKLGLDL ERIHPNKERE TLHLGKLFFE TEPMVAQLPE TLPSHKADNH
ILQTGLALKL QYPSRNVTLV TKDINMRIKS STVGLHSEDY YNDRVLEDAD LLFSGWEVLP
EHFFEENFSK MKSWQEDNKT FYELELDETH HWYPNQCLLS ANESGFSAIV RKVEHNIATL
EYMHNFEQSK RSVWGITARN QEQNLALNFL MDPNIDFVSL LGTAGTGKTL LALAAALEQT
LDEGIYNEII MTRATIPIGD DIGFLPGTEE EKMTPWMGAL MDNLEVLTHS DGHVTDWEKE
STQELLNKRI KIKSLNFMRG RTFQNKFIII DESQNLTPKQ MKTLITRSGE GTKIVCLGNI
GQIDSPYLTE TTTGLTYIVD RFKNWPHSAH ITLRQGERSR LAEFASESL