Gene Tcr_1530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1530 
Symbol 
ID3762260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1667170 
End bp1668174 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content43% 
IMG OID637786266 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_391796 
Protein GI78485871 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00000759272 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAC CGACTTTATT CAGTGGTATT CAACCCTCTG GCGACCTAAT GATTGGAAAC 
TATATTGGAT CAATCAAAAA TTGGGTGAAT ATGCAGGATG ATTACGACTG TTTATTTTCA 
CTGGTGAACA TGCACGCCAT TACTGTTGAA CAATCGCCCG AAGAACTGGC AAAACGTAGT 
TTGGATTTCG TAGCGCTTTA TTTGGCCAGT GGCATTGATC CGGATAAAAG TACGGTGTTT 
ATTCAATCGC ACGTACCGGC ACATTCCGAG CTTGCCTGGA TTCTAAACTG CTCCACTTAC 
ATGGGCGAAT TGAACCGCAT GACACAGTTT AAAGACAAAT CGCAAAAACA TGCTCAGAAC 
ATCAATGTTG GTTTATTTGA CTACCCTGTT TTGATGGCCG CAGACATTTT GTTATACCAA 
ACCGAGATGG TGCCGGTTGG CGCAGACCAA AAACAACATT TAGAGTTGGC TCGAGACATT 
GCAACGCGCT ACAACAACCG CTTTGATCGT GAAATCTTCA AGGTGCCTGA ACCTTTTATT 
CCGCCCGCAA CGTCTGGCGG TCGCATCATG AGCTTACAAG ATCCGGCGTC GAAAATGTCC 
AAGTCGGATG AAAACAAAAA CAACTTCATT GCCTTATTGG ATGACCCGAA AACCATCATC 
AAAAAATTCA AAAAAGCCCA GACCGATTCA GGCACTGAAA TTTCTTACGA CGTGGAAAAC 
AAACCCGGTG TCTCTAATTT ACTGACGATA TATTCGGTCA TCAGTGGTCA ATCGATTGAC 
GAAGTGGTTC GCCACTTTGA AGGTAAAATG TATGGTCACC TCAAGGTCGA GTTGGGCGAA 
TTGGTTGTGG AATATCTCAA ACCGATTCAA GATAAATTCC ATGAAATTCG CACGGATGAG 
ACCGAATTAA AAGCGATTTT AAAGAAAGGC GCACACCAAG CACAAGAACA AGCACAAAAA 
ACACTCCGCG ACGTTCAAGA ATCCATTGGT TTTGTTTTAC CTTAA
 
Protein sequence
MSKPTLFSGI QPSGDLMIGN YIGSIKNWVN MQDDYDCLFS LVNMHAITVE QSPEELAKRS 
LDFVALYLAS GIDPDKSTVF IQSHVPAHSE LAWILNCSTY MGELNRMTQF KDKSQKHAQN 
INVGLFDYPV LMAADILLYQ TEMVPVGADQ KQHLELARDI ATRYNNRFDR EIFKVPEPFI 
PPATSGGRIM SLQDPASKMS KSDENKNNFI ALLDDPKTII KKFKKAQTDS GTEISYDVEN 
KPGVSNLLTI YSVISGQSID EVVRHFEGKM YGHLKVELGE LVVEYLKPIQ DKFHEIRTDE 
TELKAILKKG AHQAQEQAQK TLRDVQESIG FVLP