Gene Tcr_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1526 
Symbol 
ID3762256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1663308 
End bp1664093 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content46% 
IMG OID637786262 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_391792 
Protein GI78485867 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.25266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTAA CAAAACTGCA TAAAATGAAA CAAGCAGGCG AAAAGATTGT TTGTTTGACC 
GCATATGAAG CCAGTCAAGC ATACTGGGCT GTTGAAGCAG GGGTTGAAGT CATTTTGGTA
GGGGATTCGT TAGGTATGGT TGTGCAAGGC CATCAAACTA CCTTGCCTGT TACGTTGAAT
GACATGGTGT ATCACACGCA AATGGTGCAG CGTAAAAACC ACCAGGCCTG GTGCATTGCG
GATATTCCTT TTATGTCTGA TATGAATTTA TCCAGTGTGT TGGACTCGGC GGCTCGGTTG
ATGAAAGAAG GCCAAGCCAA TATGGTGAAG CTTGAAGGCG GGCAAAGAGT GGTTGAGATG
GTTCAAGCGC TTTCTGATTT GGGGGTGCCA GTTTGTGGTC ATTTAGGGTT GTTGCCTCAG
TCCGTTCAGA AAAAAGGTTA TCAAGTGGCC GGCAAAGAAG CCGAATCGGC CGCTAGATTG
CTGGGCGAAG CCAAAATGTT AGAAAGCGCC GGTGCGGATA TGTTGGTGTT GGAATGTGTG
CCTGCGCAGT TGGCCAAACA AATTACACAA AACCTATCGA TTCCTGTGAT TGGAATTGGA
GCAGGGCATG AAACGGATGG TCAGGTACTT GTTTTGCATG ATGTTCTTGG TTTGACGATT
GGTAAGGCGC CAAAATTTTC AAAGAATTTT TTATCTGAAG CCGACTCCAT TCAAACTGCT
TTATACCAGT ATGTTTCAGA TGTGAAAAGT GGACGTTTTC CCGCTTCGGA ACATTGTGTA
GGGTAA
 
Protein sequence
MTLTKLHKMK QAGEKIVCLT AYEASQAYWA VEAGVEVILV GDSLGMVVQG HQTTLPVTLN 
DMVYHTQMVQ RKNHQAWCIA DIPFMSDMNL SSVLDSAARL MKEGQANMVK LEGGQRVVEM
VQALSDLGVP VCGHLGLLPQ SVQKKGYQVA GKEAESAARL LGEAKMLESA GADMLVLECV
PAQLAKQITQ NLSIPVIGIG AGHETDGQVL VLHDVLGLTI GKAPKFSKNF LSEADSIQTA
LYQYVSDVKS GRFPASEHCV G