Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_1526 |
Symbol | |
ID | 3762256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 1663308 |
End bp | 1664093 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637786262 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_391792 |
Protein GI | 78485867 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.25266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTAA CAAAACTGCA TAAAATGAAA CAAGCAGGCG AAAAGATTGT TTGTTTGACC GCATATGAAG CCAGTCAAGC ATACTGGGCT GTTGAAGCAG GGGTTGAAGT CATTTTGGTA GGGGATTCGT TAGGTATGGT TGTGCAAGGC CATCAAACTA CCTTGCCTGT TACGTTGAAT GACATGGTGT ATCACACGCA AATGGTGCAG CGTAAAAACC ACCAGGCCTG GTGCATTGCG GATATTCCTT TTATGTCTGA TATGAATTTA TCCAGTGTGT TGGACTCGGC GGCTCGGTTG ATGAAAGAAG GCCAAGCCAA TATGGTGAAG CTTGAAGGCG GGCAAAGAGT GGTTGAGATG GTTCAAGCGC TTTCTGATTT GGGGGTGCCA GTTTGTGGTC ATTTAGGGTT GTTGCCTCAG TCCGTTCAGA AAAAAGGTTA TCAAGTGGCC GGCAAAGAAG CCGAATCGGC CGCTAGATTG CTGGGCGAAG CCAAAATGTT AGAAAGCGCC GGTGCGGATA TGTTGGTGTT GGAATGTGTG CCTGCGCAGT TGGCCAAACA AATTACACAA AACCTATCGA TTCCTGTGAT TGGAATTGGA GCAGGGCATG AAACGGATGG TCAGGTACTT GTTTTGCATG ATGTTCTTGG TTTGACGATT GGTAAGGCGC CAAAATTTTC AAAGAATTTT TTATCTGAAG CCGACTCCAT TCAAACTGCT TTATACCAGT ATGTTTCAGA TGTGAAAAGT GGACGTTTTC CCGCTTCGGA ACATTGTGTA GGGTAA
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Protein sequence | MTLTKLHKMK QAGEKIVCLT AYEASQAYWA VEAGVEVILV GDSLGMVVQG HQTTLPVTLN DMVYHTQMVQ RKNHQAWCIA DIPFMSDMNL SSVLDSAARL MKEGQANMVK LEGGQRVVEM VQALSDLGVP VCGHLGLLPQ SVQKKGYQVA GKEAESAARL LGEAKMLESA GADMLVLECV PAQLAKQITQ NLSIPVIGIG AGHETDGQVL VLHDVLGLTI GKAPKFSKNF LSEADSIQTA LYQYVSDVKS GRFPASEHCV G
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