Gene Tcr_1523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1523 
Symbol 
ID3762093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1660837 
End bp1661583 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content42% 
IMG OID637786259 
ProductOmpA/MotB 
Protein accessionYP_391789 
Protein GI78485864 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAGA AATCTGATGA TTGTCCTACC TGGTTAGCGA CTTTTGCCGA TTTAATGTCG 
TTGTTGATGG CAGTATTTGT TTTACTGTTT GCCATGTCGA CGCTGGATGC TAAAAAATAT
GAAGGGATTG TCGAGTCTCT CACGAATACT TTGGGGCATG GTGCCGGCAT GAGTCAGGTT
CAGTTGGAAT ACTTTAAAAA AACAGAGCAA ATTAACCCCA TTCCAATGCA GTCATCAAAA
ATTGAGGCCA GGCCTGAAAA GCTCAAGCCT TTGTATGAAA GTATTGCGAA AACTTATGAA
AAGTCTCAGC AGGAAAGTAA TATTGAAGTA ACCATTGATG AGGAACGTCA ACAGGTCAAA
GTCTCTTTTC CGGAACGGAT TTCATTTCCA ACAGGAGAAG CGGATTTGAA GCCTGGCTTT
TCGGTGCAGC TACGAAAATT AAAGAATTTG ATTGATAACA CAATCTTGGT GAAGGCGATT
GGTCATACGG ATAAACGACC AATCAGTAGT GATCGTTTCA GGTCTAACTG GGAATTATCC
AGTGCCAGAG CGGCTGCGGT CATTCAGCAA CTCATTGATG ATAAGATTAT TACGCCTGAC
CAGGCTGAAG TGATTGGTGT GGCAGATACG CACCCAGTGG ATGAGCAAGA AAATGATGCG
GCTTATGCTT TAAATCGGCG AGTTGAGGTT GTTTTGATTC CTCATTCTCA TGAGCATTTT
AAAAGGCGGA ATATTGAAAT AGAGTAA
 
Protein sequence
MSKKSDDCPT WLATFADLMS LLMAVFVLLF AMSTLDAKKY EGIVESLTNT LGHGAGMSQV 
QLEYFKKTEQ INPIPMQSSK IEARPEKLKP LYESIAKTYE KSQQESNIEV TIDEERQQVK
VSFPERISFP TGEADLKPGF SVQLRKLKNL IDNTILVKAI GHTDKRPISS DRFRSNWELS
SARAAAVIQQ LIDDKIITPD QAEVIGVADT HPVDEQENDA AYALNRRVEV VLIPHSHEHF
KRRNIEIE