| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1519 |
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| Symbol | |
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| ID | 3762089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1654661 |
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| End bp | 1656406 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637786255 |
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| Product | Lipid A export ATP-binding/permease protein MsbA |
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| Protein accession | YP_391785 |
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| Protein GI | 78485860 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGATC GTCACACCCT CTCGCTTTAC AAAAGGTTAC TGAAGTATAT TAGTGGCTAC
AAATCCGCCA TTTTTATTAC CTTAATCACC ATCGCAATCA TTGCCGCTAC AGAACCACTT
AGTGCAATCA TTCTTGGGAA TCTGGTAGAC GAGAGTTTAA TTGAAAAAGA TCCGAACTCT
TTCCTACTTC TACCGCTTCA ATTAGCGGCC GTCTTCATCG TCAAAGGCGT TGCTGAATAT
TTCAGTAAAG TCATGAGCAC CTGGATTGCC CAAAAAGCCA TTTTCAATAT CCGCTCAGAA
CTCTATGACA AAATGTTGTG TTTACCGCAA GCAGAGCACA ATCAAACCTC TACAGGCACA
CTCATGTCTA AGGTGACGTA TGATGTCACC CAAACAGGCA ATGCCCTTTC TGAAGCATGG
ATTGTCATCG CCAGAGACAG CCTAACCATT CTTGCCCTAC TGGCAACTTT AATTTACTAC
TCTTGGCAGT TAACCTTAGT CATGCTGATT ATTGGCCCCA TCGTGGCCTT TTTCATTGAT
AGAGCTGGCA AATTAATGCG CACTTCCAGT ACAGACATGC AAGACAATAT GGGAGAAATG
ACGCACCGGT TAGAAGAAGG TTTAAAGGGC TACCAAGACA TTAAGATTTA TGGCTCTGAA
AAATACGAGC TTGACCGATT CAAAGCCTCT GCAGAATCTC TACGTCAAAA CACAATGAAA
GTGATCAAAG TGTCCGCTTT GAATGTTCCG TTGGTTCAGG TTATTGCCGC AATTGCTTTG
TCCATCGTTG TGTATATCGC GGTACAAATG GTCAATGCCG AAACCATGAC CGCCGGAAAT
TTAATTACTT ATGTTACCGC CATGGGCTTA ATCTTTGAAC CCATCCGAAG AATCACTAAC
ATCAATGCAA CCGTTCAAAG AGGAATGGCC GCCGCTAAAA GTATCTTTGC TATATTAGAC
ACCCCAAGTG AAGCCAACAA CGGCAAGATC GAATTATCGA ACGTCAACGG CCAAATTGAT
TTCAACAACG TCTCATTTTC TTATCTAGGC ACTGAAAAAA CCGCACTAAA TAACTTTTCC
TTAAGCATTC CAGCTCGTAA AACCACCGCT TTAGTCGGTC AATCGGGTAG CGGAAAAACA
ACCTTAGCGA ATTTAATCAC TCGCTTCTAT CAAGTCAACC ATGGCACGAT TACAATTGAT
GGCATTGCTC TTGATGAGAT AGAACTGAAT AATCTTCGAG CCAATATTGC ATTTGTCAGC
CAAAATGTGG TGTTGTTTAA TGACACGATC GCTGCCAACA TAGCTTATGG ACATGAAGAA
TATGACGAAC AAGCCATTAT GAATGCGGCT AAAGCCGCTC ATGCCTGGGA GTTTATTGAA
AAATTACCCG AAGGACTAAA CACCATCATT GGTGATAATG GAACACTTCT ATCAGGTGGT
CAACGCCAAC GATTAGCGAT TGCGAGAGCC TTTTTAAAGA ATGCGCCTAT TTTGATTATG
GACGAAGCCA CTTCGGCATT GGACAATCAA AGTGAAAAAC TGATTCAAGA AGCGATGAAT
TCTCTCAGAA AAAACCGAAC TGTGATCATC ATTGCCCATC GATTGAGCAC GATTGAAAAT
GCCGATAAAA TCGTAGTATT GGAAGAAGGT TCTCTGAAAG AGCAAGGCAC TCACGCTGAG
CTAATGGCCT TAAATTCTAT TTACAGTCAA TTGTACAAAC AAGGTAATCT TAGTGAGCAA
GTTTAA
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| Protein sequence | MFDRHTLSLY KRLLKYISGY KSAIFITLIT IAIIAATEPL SAIILGNLVD ESLIEKDPNS
FLLLPLQLAA VFIVKGVAEY FSKVMSTWIA QKAIFNIRSE LYDKMLCLPQ AEHNQTSTGT
LMSKVTYDVT QTGNALSEAW IVIARDSLTI LALLATLIYY SWQLTLVMLI IGPIVAFFID
RAGKLMRTSS TDMQDNMGEM THRLEEGLKG YQDIKIYGSE KYELDRFKAS AESLRQNTMK
VIKVSALNVP LVQVIAAIAL SIVVYIAVQM VNAETMTAGN LITYVTAMGL IFEPIRRITN
INATVQRGMA AAKSIFAILD TPSEANNGKI ELSNVNGQID FNNVSFSYLG TEKTALNNFS
LSIPARKTTA LVGQSGSGKT TLANLITRFY QVNHGTITID GIALDEIELN NLRANIAFVS
QNVVLFNDTI AANIAYGHEE YDEQAIMNAA KAAHAWEFIE KLPEGLNTII GDNGTLLSGG
QRQRLAIARA FLKNAPILIM DEATSALDNQ SEKLIQEAMN SLRKNRTVII IAHRLSTIEN
ADKIVVLEEG SLKEQGTHAE LMALNSIYSQ LYKQGNLSEQ V
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