Gene Tcr_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1518 
Symbol 
ID3762088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1653997 
End bp1654659 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content40% 
IMG OID637786254 
Productprotein tyrosine/serine phosphatase 
Protein accessionYP_391784 
Protein GI78485859 
COG category[T] Signal transduction mechanisms 
COG ID[COG2365] Protein tyrosine/serine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACT TACAAACAAA ATGGGACCGC CTTAAAGCAC ACTTAGAGGC TTGGTTTATT 
GACCACGAAA TACTACGATT GTTTTATCGA AACTTTCATG CATTATCAAA TAATGCTTAC 
CGTAGCAACC ACCCTTCTGC AGCATTTATA CAAAAGCTAC ATGAAAAAAA AGGCATCAAA 
ACCATCATTA GCTTAAGACG TGCCGACCAA ACAGGGCAGT ACCAATTAGA AAAAGAAGCA 
TGTGATCGTT TAGGAATCAA GCTAATCAAC CACCCCATGT CTTCTAGAAG CTTTCCAGAT 
GTTGACAAAA TCCTTCAAGC CAAGAAAATT CTTGAGGACG CCGAATACCC AATTCTCATT 
CACTGTAAAT CCGGGGCTGA CCGTGCTGGA ATGATGAGTG TTTTTTACAA GCATTTCATC 
CTTAACCAAC CAATAAAAGA GGCCCTCTCT GAACTCAACA TGAAATACGG GCATTTTCGT 
TGGGCAGACA CCGGCAAACT GGACATATTC TTTGAAAGCT TCCTAACCTT TGAAAAAGCC 
CACCCGAATG TTTCTTTTGT TGAATGGGTT CAAAACCATT ACGATAAACC AACACTAAAT 
AAAGAGTTCC ATGCTGCTGG CTGGGCTAAC ATTGTTGTTA ATCGTATTTT AAAAAGAGAG 
TAA
 
Protein sequence
MENLQTKWDR LKAHLEAWFI DHEILRLFYR NFHALSNNAY RSNHPSAAFI QKLHEKKGIK 
TIISLRRADQ TGQYQLEKEA CDRLGIKLIN HPMSSRSFPD VDKILQAKKI LEDAEYPILI 
HCKSGADRAG MMSVFYKHFI LNQPIKEALS ELNMKYGHFR WADTGKLDIF FESFLTFEKA 
HPNVSFVEWV QNHYDKPTLN KEFHAAGWAN IVVNRILKRE