| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1505 |
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| Symbol | |
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| ID | 3761730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1637917 |
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| End bp | 1641768 |
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| Gene Length | 3852 bp |
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| Protein Length | 1283 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637786241 |
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| Product | membrane protein-like |
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| Protein accession | YP_391771 |
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| Protein GI | 78485846 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000453243 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAC GGATTCAGCA GTTATTGTTT CTTCTGTTAG CCCTGTTTGT TGCTTACTTA
TTAATGGTTC GAGGGGTGAT TACCTGGGTG CAATATGCAC CAGAACAATT TTTATCGTAT
GCTGAACAGT GGAATGACTC GACAATAAAA GTTGAAAAAA TTGCGATAGA TCAAAGCTGG
TTAGGACTGG ATTTCGAAGT TCAAAGCGTC AGTTATAAGG ATTCGACCAG GGTCGCCTCT
TTGGCATCTG CCAAGGGGGA TCTCAATATC TTTTCTCCTT TCTTTCCAGA TATGAGTTTT
GGTAATCGTT TGAGTGTGTC CGGTTTACAA GTGGACATCC TTTCTTTGGA TGATAGCAAA
GACGACAGTC CCTCGAACGA AATGGATATA TGGCAGGTTG TTTCAGAGAA TTGGAAATCT
TTGTCAATCA ATAAAATATG GAAAGTTGTA AACCTAGAAG ATGTCTCTTT TAGTTCAAAA
GCAAAACAGG ACGGAAGAGT TACGTTAGGT ATTGATTCCT TTCAAGCCTA TCGAGGTCTT
AAGTGGTCTT TTGGAGGAGT GTTAAGTGTT CATGCTCAGC AAGAGCTTTC AACTCAGCTA
CAAGTAAAGG GTGACTTTGA TATTAACTTG TGGGGAAAAC CGGAAGAAGG CAGTTTTTCG
GCTCATTTCC TAACGCCTCT GAATTTGGCG AATTTGTATC GAGTGATGCC TGAAACTTGG
ATTGAAACCT TACCTACCGG TGAAATATTA GGTGACCTTT CTCTTGACGT TAAAAAAGGA
GAGCTCTCCA AACTTAATAT TACCAGTAAT GCTCAGGATT TAACTTGGCC AGAAAATGAT
CATTTATTAC CCAAAAGCAT CGGAATTGGA TTGAATTGGG TCGCGACGAA CCAATTTAGT
GGGAATGCGT TAGAAAACTG GCAATTTGAA TTAGAAAAGA TTCGTTTTGG TAAAGAGTAT
TTAAAAACCA TATCCCCTAT CTATTTAAGC TTGAAAAACA ATAGAACTTT AAAGTTTCAA
GCCGATAAAG TGGACTTTAA TGTTCTAAAG CCTTTTTTTA AATTGTTTAT GGCTAAGCTT
GATTATCAAG GGTTTGGTAA AAATTTAAAA ACACTGAACT TAAAGAATGT GGAAGGGCTG
TTAAATTTAG ATACTCTGGA TTTAAGGTAT TTGACGCTTC AAGTACCGAG TATTCAGCTT
CCTGCCGATA AAAATCTACC AGGCCTGGCT CTGAAAGATT TACGGGTAGA AAAAAGTGAA
AAAGATATCT GGTTTAAAAC ACCTCACCCA ATTAACCTGT CAATAGATGT TATCAGTTCA
GATCCCATTG TTCTGGATTT GAAGCAAGGG TTGCACCTCC AACTTATTCA TCAGAATCAT
CAGTGGCAAA CAAATGATGC GCGTTTTACA CTTAATTCAA TGCCTGTGAA TTTAACCGCC
ACGGGTGACT TCTCTGGAAA GCTTGATTTG GATATGACAA TTGAGCCCGA CAAGCTGTCT
TTCGTTAAAC AGTATCTTCC ATATGGCTTG ATGTCTTCCA AGCTTGAAAA TTGGTTAAAG
GCGGCTCTTG TTAAAGGAGA CGGCATCAAG GGGCGTTTAA GAGTCAAAGG GGATTTAAAT
GACTTTCCTT TTAGACATCA AGAAGGCCTT TTTGAAGCAA CAGCAGACAT TCATAAAGCC
GAGCTTAAGT TCCAGCCAGA CTGGCCGGCC TTGGACGATT TTTCGGCAAA GTTGAAATTT
ACACCTTATA ACCTTCAGAT TACGTCAAAG AAAGTTATGT TGGGTAACGT GACGGGGCAT
GATGTTGTGG TTGATATCAA AGCCTTGGAT ACTAAAAACA TTGCCGTTCA AATAAAGGGA
AAAGCTGAAG GGGATGGAAA AGAAGCGGTT GCTTACCTTT TAAAAACGCC ATTGGCTGAA
AAAATTGGCA TGGCGTCGTT CTTACAAGAG CATACAGATT TATCTGGACC CGTATCGGTT
GACCTTTCTA AAATTTGGAT ACCCGTTTAT GGCTATGATA AAAAAGAAGA GTCTGTTGAG
GGTCAAGTTG ATTTTGATAA AGTGGCGTTA ACACTATATG ACCGGTTGAT CTTTAAAGAT
GTTCAAGGGC GACTTAATTT TACGGAACAA AAAGTTTCAG CTCAAAAAAT ATCCGCTCTG
TTTCAAGGCG GACTCGTTCA TACCTCAATT GAGACCCAAA ATGGTCAGGC CATTATCAAT
TCAAAGGGGG AAGCCACTTT TAATGAAGAG CTTTATCAAG GTCGTTTACC ATGGGAAACC
TCCATCCAGA TTCCATTTAA AAGTAAAGAT CACATAAAAG TTGTTGCCGA AGCCGACTTA
ACGCAATTAG TGAGTAGGTT TCCTGCTCCG TTGAATGATG AAAGCTTGCG AGAGGCTAGT
ATCCGTCCTA AAAATGCTCA TTCAACAATA CAGGTCGACG AAGATGCACT TGATATTCAG
TTTACAGTCG GTGACTTGAT AAAAGGCAAA ACGCAATACT CTTTTTCGGG TGAATCCTTT
AATCAGTTTG TCGCTATTGT AGGTGAGGGC CAGTCTGTCC CTACACTGGA TTCTGGTAAT
AACTTTTTTG TGACCGGCCA GTTAGACACG GTCAATTTGG ATGAATGGAT GACAGTCTGG
CCACAAATAA AAGAAAAGTT CGCTCTTAAA CTGCCTTCTT CAAAGAGTCA GGCACCTCAA
GCAAGTTGGC AAGGGTCAAA TTTACACTTA AATAAAGTGA TCCTAGCGGA TTATGATTTT
AATGACATCA AGCTTAACTG GATAACGGTT AAGGAAAAAG AACAATCAAG TTTAGCAATG
AGCATTAAAG GTTCGGATCT TGATGCTGTT GCGAATGAAC TGTCAAATGG AGATTATGAA
GTTAAATTAT CAAAACTTAA CATGATCTCT CCCGTTAAAA ATCCAGAAGA ACTTGAAAAG
AAAAAACCAT GCAAAGAATC CAGTGGTGAT GTTGTATCTG AAACAAAAGT TTATTTTCAA
GGAAAGAATA TTAATCTTAA TGGCAAAAAA ATAGCACACT TAAGTTTTAA TATGACGGAT
ACGACGGAAA TGTTAACGCT GTCAAAGATT AATATTCAAC CAGAAGGTGT GAAAGGCGTT
TTTAATGGAG GTTATCAATA TAGCAAAGTC AATAACACCA GCCATCTGTC GGGTAAAGCT
GATTCGAACG ACGTTGAAAA TTTAACTCTG TTCTTAGGGC TTAAAAAAGG GTTTAAAGGG
AAAAAGGCAG AGATGACTGT CGATTTAAAC TGGAAAGGTA ACTACCAATG CTATTCTTTA
ATAGGTCTAA AAGGAGATGT TTCGTTTACA TTGCAAGATG GGGTTATTAA AGATGCTGAA
CCTGGTATTG CAAGGCTTCT CGGGCTTCTC AGTTTTGAAT CGCTCGCAAG ACGCTTACAG
CTGAATATTA AAGATGTCAC CGATGCCGGA CTCGCTTACG ACTCAATTAA AGGGGAAGGG
CAGTTTAACA GAGGCGTTTT TGGGTTTGAA AAACTGAATC TAAAAGCGCC GGCGGCTAAA
GCAAAAGTCT TTGGTGAAGT GAACTTAATA CAAAAAGAGT TGAATCTATC GGCCGAAATT
ACTCCGTCAA TCGGAAGCTC ATTACCAGCG ATAGCTGCGA TTAGTGGGTT GGCGACACCG
ATTGCAGGTT TGGCTGCTTA TGCATTTATG AAGATTGTGC CCATCGTGAA TGAAGATTTA
GTGACTTATC GTTATGAGGT CAAAGGAACC TTTGAATCGC CAGATATTAA AGCTAAGGGG
TTGAATTTAG ATCTAATAAA TCTAAAAGGA CAGTCAGACA TTAAAGGCGG TTCGATTCTC
GATTCAGAAT AA
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| Protein sequence | MLKRIQQLLF LLLALFVAYL LMVRGVITWV QYAPEQFLSY AEQWNDSTIK VEKIAIDQSW
LGLDFEVQSV SYKDSTRVAS LASAKGDLNI FSPFFPDMSF GNRLSVSGLQ VDILSLDDSK
DDSPSNEMDI WQVVSENWKS LSINKIWKVV NLEDVSFSSK AKQDGRVTLG IDSFQAYRGL
KWSFGGVLSV HAQQELSTQL QVKGDFDINL WGKPEEGSFS AHFLTPLNLA NLYRVMPETW
IETLPTGEIL GDLSLDVKKG ELSKLNITSN AQDLTWPEND HLLPKSIGIG LNWVATNQFS
GNALENWQFE LEKIRFGKEY LKTISPIYLS LKNNRTLKFQ ADKVDFNVLK PFFKLFMAKL
DYQGFGKNLK TLNLKNVEGL LNLDTLDLRY LTLQVPSIQL PADKNLPGLA LKDLRVEKSE
KDIWFKTPHP INLSIDVISS DPIVLDLKQG LHLQLIHQNH QWQTNDARFT LNSMPVNLTA
TGDFSGKLDL DMTIEPDKLS FVKQYLPYGL MSSKLENWLK AALVKGDGIK GRLRVKGDLN
DFPFRHQEGL FEATADIHKA ELKFQPDWPA LDDFSAKLKF TPYNLQITSK KVMLGNVTGH
DVVVDIKALD TKNIAVQIKG KAEGDGKEAV AYLLKTPLAE KIGMASFLQE HTDLSGPVSV
DLSKIWIPVY GYDKKEESVE GQVDFDKVAL TLYDRLIFKD VQGRLNFTEQ KVSAQKISAL
FQGGLVHTSI ETQNGQAIIN SKGEATFNEE LYQGRLPWET SIQIPFKSKD HIKVVAEADL
TQLVSRFPAP LNDESLREAS IRPKNAHSTI QVDEDALDIQ FTVGDLIKGK TQYSFSGESF
NQFVAIVGEG QSVPTLDSGN NFFVTGQLDT VNLDEWMTVW PQIKEKFALK LPSSKSQAPQ
ASWQGSNLHL NKVILADYDF NDIKLNWITV KEKEQSSLAM SIKGSDLDAV ANELSNGDYE
VKLSKLNMIS PVKNPEELEK KKPCKESSGD VVSETKVYFQ GKNINLNGKK IAHLSFNMTD
TTEMLTLSKI NIQPEGVKGV FNGGYQYSKV NNTSHLSGKA DSNDVENLTL FLGLKKGFKG
KKAEMTVDLN WKGNYQCYSL IGLKGDVSFT LQDGVIKDAE PGIARLLGLL SFESLARRLQ
LNIKDVTDAG LAYDSIKGEG QFNRGVFGFE KLNLKAPAAK AKVFGEVNLI QKELNLSAEI
TPSIGSSLPA IAAISGLATP IAGLAAYAFM KIVPIVNEDL VTYRYEVKGT FESPDIKAKG
LNLDLINLKG QSDIKGGSIL DSE
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