| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1503 |
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| Symbol | valS |
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| ID | 3761723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1627978 |
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| End bp | 1630752 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637786234 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_391769 |
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| Protein GI | 78485844 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000330515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAC ATTTCGATCC TAATTCTATT GAAACAAAGT GGTATCAAAC TTGGGAAAAA
AGCGGCTACT TTAAGCCTCA AACCAGTACA ACTGGCGAAC ATTACAGCAT AATGATCCCT
CCGCCTAATG TGACCGGAAG CCTTCATATG GGGCACGCTT TCCAAGATAC GATCATGGAT
ACTTTAATTC GTTATCACCG TATGCGTGGC GACGAAACAC TTTGGCAACC TGGAACCGAC
CATGCTGGTA TCGCTACCCA AATGGTGGTG GAACGTCAAT TGGCCGCGAA AGGGTTAAGT
CGTCATGATT TAGGGCGTGA CGCTTTTACC CAAAAAATTT GGGAATGGAA GGCCGAATCA
GGCGGTACGA TTACACAACA ACTTCGTCGT TTAGGCGCAT CGCCTGACTG GAGTCGCGAA
CGGTTTACCA TGGATGACGG TTTATCTGAT GCGGTTAAAG AAGTATTTGT TCAGCTGCAT
GAAGAAGGCC TGATTTACCG AGGCAAGCGT TTGGTGAACT GGGATCCGGT TCTGCATACG
GCTGTTTCCG ATTTGGAAGT CCTTTCAGAA GAAGAAATGG GCAGCTTATG GCATATGCGT
TACCCGTTAT CCGATGGATC AGGGCATTTA ATCGTCGCCA CCACCCGTCC AGAAACCATG
TTTGGCGATC AAGCCGTTGC TGTTCATCCG GATGATGAAC GCTATCAACA CTTAATAGGT
CAAACCATTA CCCTTCCTCT TGTCGGTCGC GAAATTCCAA TCATCGCAGA TGATTATGTG
GAAATGGATT TTGGAACAGG TTGCGTCAAA ATCACCCCTG CGCATGACTT TAATGACTAT
GAAATGGGGA AACGTCATAA TCTTCCGATG CTGAATGTCA TGACCATTGA TGCGGCCATG
AATGAAGAAG TGCCTGAAAA GTATCAAGGG TTGGATCGTT TTGAGGCCAG AAAACAAGTC
ATTGCGGATC TAGAAGTTCA AGATTTAATG GAAAAAATTG TACCGCATAA ATTAATGGTG
CCTCGCGGTG ATCGTTCGCA TGCCGTCATC GAACCTTTTT TAACGGATCA ATGGTATGTT
GCGGTAAACG AGCTTGCGAA ACCGGCCATT GATGCGGTTA AAAACGGAGA CATTGAATTT
GTTCCTAAAA ACTGGGAAAA CACTTATTTT GAATGGATGA ATAATCTTCA AGATTGGTGT
ATCTCGCGAC AAATTTGGTG GGGCCATCGA ATCCCAGCTT GGTATGATGA AGGAGGCAAT
GTTTATGTTG CTCGCTCTGA AGAAGAAGTC CGTGCTAAAT ATAACCTAGA TACGAGCCAT
TCTCTCCAAC AGGATGACGA TGTGTTAGAC ACGTGGTTCA GTTCAGCGTT ATGGACGTTT
TCAACTCTAG GATGGCCTGA AAAAACACCC GAACTTGAAA AATTCCATCC GACATCCGTA
CTCGTTACCG GGTTTGACAT CATTTTCTTC TGGGTGGCAA GAATGATTAT GATGACACTT
AAATTTACGG GTGAAGTACC GTTCAAACAA GTTTATGTTC ATGGTCTTGT TCGTGACAGT
GAAGGCCAAA AGATGTCGAA GTCAAAAGGA AATGTACTCG ACCCAATTGA CTTGATCGAT
GGTATTGATC TTGAAAGCCT GGTTGCCAAA AGAACCACTG GCATGATGCA GCCAGAAAAA
GCCGCTCAAA TTGAAAAGAC AACACGCAAA CACTTTGGCG AAGGTATTGA GTCATATGGT
ACAGATGCAC TGCGTTTCAC CTTTGCATCA CTGGCTTCTA CCGGACGAGA TATCCGTTTT
GATTTAAACC GATGCGAAGG CTATCGAAAC TTCTGTAATA AGTTGTGGAA TGCAACGCGT
TATGTACTTA TGAACACAGA AGAGAAAGAC ACCGGTACAG ATGAAACGCT TGATACCGAA
CTGTCACTAG CGGATAAGTG GATTATTTCA AAACTGCAAA ACGTAGAAAT GGACGTTGCC
AAGCACTTTG ATCAATATCG TTTTGATCTT GCAGCGCATA CCCTATATGA ATTCACATGG
AATGAATATT GTGATTGGTA TTTAGAGTTG GTAAAACCCA TTTTAAATTC AAAAACAGCG
ACAGAAGCTC AACAACGAGG TACTCGCCAA ACGCTGGTAA GAGTTTTAGA AACAATTTTG
CGTTTATTAC ACCCTATTAC ACCCTACATC ACTGAAGAAG CTTGGCACAG TGTTGCATCA
CTCGCTGGGA AAACCGGCGA TACAATCATG TTACAACCCT ATCCACAACC GAATGAAGCT
CTGATTGATA CGGCATCGGA AAAAGAGCTG GAATGGGTTA AACACGTTAT CATGGGCGTT
CGTAAAATTC GTTCGGAGAT GGATATTGCG CCAAGTAAAG CCTTACCTAT CCTTCTAACC
AATCTGCAAG AGCAAGATAA AGTATGGCTG GAAAACAACC GCGTTTTCTT ACAAACCTTG
GCGAAACTGG ACACTATAAC GTTATTGGAA AATGAAACAG AAGCGCCAGA ATCCGCCGTT
GCATTGGTTG GCGAAATGAA AATTTTAATT CCAATGGCCG GCCTCATTGA TAAAGAAGCC
GAACTGTCGC GCCTATCAAA AGAGATCAAA CGACTCGAAG GTGAAGTAAA ACGTTTCACA
GGTAAATTAT CAAATGAAAG CTTTGTCTCT AAAGCACCCG AAGCCGTGGT TGAAAAAGAA
AAGCAAAAGT TACAAGACAC CGAAATTGCA CTAAAAAACT TAAAGGATCA ATATGAAAAA
ATTAGTCAAA TCTAA
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| Protein sequence | MEKHFDPNSI ETKWYQTWEK SGYFKPQTST TGEHYSIMIP PPNVTGSLHM GHAFQDTIMD
TLIRYHRMRG DETLWQPGTD HAGIATQMVV ERQLAAKGLS RHDLGRDAFT QKIWEWKAES
GGTITQQLRR LGASPDWSRE RFTMDDGLSD AVKEVFVQLH EEGLIYRGKR LVNWDPVLHT
AVSDLEVLSE EEMGSLWHMR YPLSDGSGHL IVATTRPETM FGDQAVAVHP DDERYQHLIG
QTITLPLVGR EIPIIADDYV EMDFGTGCVK ITPAHDFNDY EMGKRHNLPM LNVMTIDAAM
NEEVPEKYQG LDRFEARKQV IADLEVQDLM EKIVPHKLMV PRGDRSHAVI EPFLTDQWYV
AVNELAKPAI DAVKNGDIEF VPKNWENTYF EWMNNLQDWC ISRQIWWGHR IPAWYDEGGN
VYVARSEEEV RAKYNLDTSH SLQQDDDVLD TWFSSALWTF STLGWPEKTP ELEKFHPTSV
LVTGFDIIFF WVARMIMMTL KFTGEVPFKQ VYVHGLVRDS EGQKMSKSKG NVLDPIDLID
GIDLESLVAK RTTGMMQPEK AAQIEKTTRK HFGEGIESYG TDALRFTFAS LASTGRDIRF
DLNRCEGYRN FCNKLWNATR YVLMNTEEKD TGTDETLDTE LSLADKWIIS KLQNVEMDVA
KHFDQYRFDL AAHTLYEFTW NEYCDWYLEL VKPILNSKTA TEAQQRGTRQ TLVRVLETIL
RLLHPITPYI TEEAWHSVAS LAGKTGDTIM LQPYPQPNEA LIDTASEKEL EWVKHVIMGV
RKIRSEMDIA PSKALPILLT NLQEQDKVWL ENNRVFLQTL AKLDTITLLE NETEAPESAV
ALVGEMKILI PMAGLIDKEA ELSRLSKEIK RLEGEVKRFT GKLSNESFVS KAPEAVVEKE
KQKLQDTEIA LKNLKDQYEK ISQI
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