| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1492 |
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| Symbol | |
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| ID | 3761614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1614976 |
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| End bp | 1616478 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637786223 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_391758 |
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| Protein GI | 78485833 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.928362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTACACA GTTTGAATAA AATTATCATC GGTGCTTTGA TTGGCTGGAT TTTCCTAATC
CTACCAACCA CCCTTTGGAG CCAAACATTT CCCAACCAAA GAATCTCCAT CTCTGAACGT
ATTCTAAACC CGTTTAAAGG CGATTTACCT GAACTGAGAA AAAGGCGATT AATCCGCGTC
TTAGTGAGTT ATACACGAAC CAACTTCTTT TTAACCCCTA AAGGGTTTCG CGGACTGGAA
TACGATCTGT TAATGGCTTA TGAAGCCTAC TTAAATAGAG GACCTAGAAA ACAGCGTTAT
GAAACGCATT TAACCTTTAT CCCCATGCCT TTCAGCGACA TCCTGCCCAA GCTTCAAGCA
GGCTATGGTG ACATTGCAGC GTCTGGCTTT ACGATCACAC CCGAACGAGA AGCCATGGTT
GATTTCACCT CTCCTTACAT TAATAATGTG AAAGAAATTC TAGTCTCCAG CAAAGACGCG
GAACCCATTG AAAAATTAGC AGATTTTTCT GGAAAGCAAA TCATCGTTGT CAGCAACAGC
AGTTACATCA TTCACTTGGA AGCCATCAAC CAAACACTGG GACGTTTAGG GCTGCCAACT
ATGGAAATCG TGAAAGCCGA CCCTTTAATC GAATCAGAAG ACATCTTAGA GCTGATCAAT
GAAGGGATTT ATCAATACAC CGTGGTTGAC AATCATATCG CTTACATCTG GCAACGCGTT
TTAGATAATA TCCAATTACA TGAAGACATG ATTGTTCACC ATGACAGCAA TATCGGTTGG
GCAATTCAAA AAAACAACCC CAGGCTCAAA GCCTCTCTTA ACGACTTCAT TCAAGCGTAT
GCACAACCAG GCCGATTTCT TGGGAATGCC ATATTTCAAA AATATTTCAA AAATACTTAT
TGGATAGAGA AACCACTGAC GCATGACCTG TTAAAACGAG TTCATTGCTT AAAGTATTAT
TTTCAACTGT ATGCTGAATT TTATGGGTTT GATTGGAAGC TCATTGCCGC ATTAGCCTAT
CAGGAATCAA GGTTTGACCC AAATAAACGG AGTCACGCCG GTGCCATTGG CATCATGCAG
GTTAGACCTT CAACCGCCAG AGACCGAAAC GTCAATCTTC CCGACATCAA AAAACTCGAA
ACCAACATTC ATGCAGGGGT GAAGTATTTA GCCTTCTTGC GGGATCGCTA TTTTTCCAGT
AATGATTACA CCCCCGAAGA AAAAGATAAC TTCACTTTGG CGGCGTATAA TGCAGGCCCA
AGAAAGGTAC TCCAGCTACA GCAAAAAACA AAACAACTAG GGTTAAACCC ATACAAATGG
TTTTACAATG TAGAAACAAC GGCACGACAA GTCATTGGAC ATGAAACCGT TAATTATGTG
ACCAGCATCC AAAAAATGCG AATTTTCCTA GATGCTTCAA AACGACTGGA CCAGAACAAA
CGCCTTTATC TAGAAAAAAC CGTCAGTGAA AACGAGTTTT TTAAAGAGGA CGATAGACCT
TGA
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| Protein sequence | MLHSLNKIII GALIGWIFLI LPTTLWSQTF PNQRISISER ILNPFKGDLP ELRKRRLIRV
LVSYTRTNFF LTPKGFRGLE YDLLMAYEAY LNRGPRKQRY ETHLTFIPMP FSDILPKLQA
GYGDIAASGF TITPEREAMV DFTSPYINNV KEILVSSKDA EPIEKLADFS GKQIIVVSNS
SYIIHLEAIN QTLGRLGLPT MEIVKADPLI ESEDILELIN EGIYQYTVVD NHIAYIWQRV
LDNIQLHEDM IVHHDSNIGW AIQKNNPRLK ASLNDFIQAY AQPGRFLGNA IFQKYFKNTY
WIEKPLTHDL LKRVHCLKYY FQLYAEFYGF DWKLIAALAY QESRFDPNKR SHAGAIGIMQ
VRPSTARDRN VNLPDIKKLE TNIHAGVKYL AFLRDRYFSS NDYTPEEKDN FTLAAYNAGP
RKVLQLQQKT KQLGLNPYKW FYNVETTARQ VIGHETVNYV TSIQKMRIFL DASKRLDQNK
RLYLEKTVSE NEFFKEDDRP
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