Gene Tcr_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1480 
Symbol 
ID3761602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1598643 
End bp1599215 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content40% 
IMG OID637786211 
Producthypothetical protein 
Protein accessionYP_391746 
Protein GI78485821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCTA AAAATAGTCG TTCTTTCTTT AGAATTGATG TGATGCTACC GTGTAGCTAC 
AGCATCCTTT CGTCGGAAGA AGCCAAAAAG CAGCCGATTC CTCCCCAAGC CGATTCGAGT 
TATATCGAAA AGCACTTCAT GAATAATTTA GCTGAATTAG ATGAACAGAT TAATACCATC 
GTTTCACAGA TTGGACAGAA AAGTACTTTA TTGGCAACGG CTTTAACGGC TTTGAATAGT 
AAACTCGATT TCCTGCTGCA CACTGTTGAC AAAAAGCAAC TGGTGCATGC GATTCCTCAG 
CAAATGGTAA ACATCAGTGC TGGAGGCGTT GCCATCAAGG TGAATGAACC TGTCACAGAA 
ACCGATAAAG TTGATCTATT GATTCAGCCT TTAGAAGAAG AGCCACCAAT ATTGGTTCGA 
TGCAGCATTG TCAAAATCAT CCCTGATAAA GATATTGCAA CAGCATCGAC CGTGGCACTC 
GAGTATGAAA ACTTATCGGA AGATGATCGT CGAAAACTGG TTTACTTTAT TCAAAGTAAA 
GAAATTGAAA TGGCGAATAA ACAAAAACAA TAA
 
Protein sequence
MASKNSRSFF RIDVMLPCSY SILSSEEAKK QPIPPQADSS YIEKHFMNNL AELDEQINTI 
VSQIGQKSTL LATALTALNS KLDFLLHTVD KKQLVHAIPQ QMVNISAGGV AIKVNEPVTE 
TDKVDLLIQP LEEEPPILVR CSIVKIIPDK DIATASTVAL EYENLSEDDR RKLVYFIQSK 
EIEMANKQKQ