Gene Tcr_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1475 
Symbol 
ID3761955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1594353 
End bp1595675 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content43% 
IMG OID637786206 
Producthypothetical protein 
Protein accessionYP_391741 
Protein GI78485816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAT TGATGAAATT GTTGGTGTTA AAAAAGTGTT CATTTCAAAA AGGGCTGACT 
TTTTTGCTTG CTTCTTTCTT GTTCAGCTCG GTTGCTTTGG CGGCGACCCC AATAAAAAAA
TCGTCTCAAA TTTATCCTAA ACATTGTGTC GTTGTCACCG GTACCGCATC CACGGAAGGG
GTGTCAGAAG CCTTTGCTCG ACAAATGGCC ATTCGCAATG GTTTGAAGCT AGCCAGCATG
CAAAATAACC TGAGTATCGA TTCCGATCAA GTGGTGAAAG ACTATACGCT GACCAAAGAT
ATGACACACT TCACCAGTCA CAGCAAAGTT TCTAAATTTA TTATTGTGGA TGAAGGGGTG
AAAGAACCGG AATTTGATGA TCTTTTTAAT GAAAAAGGAT TAAAAAAATC ACCAGAAGAA
ATCAAAAAGC TGCAAACCTA TCAAGTCCGA ATGGAAGTCT GCCTCACAGA AGATCCTAAA
GCCTGTAATA ATATTCCCGG CAACCATTAC CAGCCTAAAT TAGCGGTGGC CCGCGCTGTC
ACCACCGACT CCTATGGTGC TACAGATATT TCAAATTTAT TGGTCGGGTA TCAGAATGAG
CTGGAAAGAC GTTTGAAAAA TCAAGGCTAT CAAAACCTTG TCACGCTGGA AGATTCTTCC
GTGATTGACC CAAACCAGGC TGTCGGCCCC AATTTGTCCC CTGATGTGTT AGATCCTGTT
CGCGAAAGCA GCGGCGCACA ATTTTTATTG TTATCGGTGA TTCGTTCAGT CTCTGCGCAT
AATGAAGACC CTAAGCTCTG GAATGATATT AAACGGTTTT ACAATCGAGA AGTTCAACCG
AATGCGCGTT ATATAGAGGT TGATTCTTAT ATTGTTGACT TGATGAATCA TAAAGTGGTT
TCGCAGTTTA GAAAAGGGTT TGATATTAAA GGGGATGTCG TGGTTGGTCG TGATCGACCT
TTTGGAACCA ATGCGTTTTT TGCAACCGAC ACGGGCATGG TCTTCCATGC GCTGCTAGAA
GAAGAAACTC AAGCGGTTTA TGGTTACTTA AACTGCCGAC CTGTTGAAAC TCGAATAATT
GACATTAGAG ATGGCGAATA TATTGTTTTC TTGTCGCGTG AGTCCGGTGC GCGAGTAGGC
GATGAATTGG CGGTTTACCA TAACTTTGGT CGCCCGGTAC GTTATCAAGG GGCCGATTTG
GGAATGGATT CGAAGCCGAC CGGTTTTCTA AAAATTAAAC GTATTCAATC GAAGTTTGCT
GTTGCCGAAA TTTTGGCAAA AGAAGGATTG ATTCAAGTCG GTGACACCGT TCGCTCTTGG
TAA
 
Protein sequence
MEKLMKLLVL KKCSFQKGLT FLLASFLFSS VALAATPIKK SSQIYPKHCV VVTGTASTEG 
VSEAFARQMA IRNGLKLASM QNNLSIDSDQ VVKDYTLTKD MTHFTSHSKV SKFIIVDEGV
KEPEFDDLFN EKGLKKSPEE IKKLQTYQVR MEVCLTEDPK ACNNIPGNHY QPKLAVARAV
TTDSYGATDI SNLLVGYQNE LERRLKNQGY QNLVTLEDSS VIDPNQAVGP NLSPDVLDPV
RESSGAQFLL LSVIRSVSAH NEDPKLWNDI KRFYNREVQP NARYIEVDSY IVDLMNHKVV
SQFRKGFDIK GDVVVGRDRP FGTNAFFATD TGMVFHALLE EETQAVYGYL NCRPVETRII
DIRDGEYIVF LSRESGARVG DELAVYHNFG RPVRYQGADL GMDSKPTGFL KIKRIQSKFA
VAEILAKEGL IQVGDTVRSW