Gene Tcr_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1472 
Symbol 
ID3761952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1592413 
End bp1593096 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content43% 
IMG OID637786203 
Productflagellar hook capping protein 
Protein accessionYP_391738 
Protein GI78485813 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTC CAGCAATCAG CAGCAATAAT ACCGATTATA TGAAAGCGCT TCAGCAATCA 
ACGAATGGAA AGTCGAACGC GCCTGATCAG CAATTGGGAC AGGCGGATTT TCTCCGACTC 
TTAACCACAC AGCTTCAAAA CCAAGACCCT AATAAACCAA TGGATCCGAC TAATTTTGTG 
ACTGATTTAA CACAGATGAG TCAGTTGGAA GCAACCACTA AAATGAATCA ATCGATGTTG 
GCCATGACGA CCGGCCTGCA AAATATGCAA GTGATGCAGT CGGCCTCATT GATTGGTAAA 
AATGTTCAAG CCATCGGCGA TACGATGTCT CATGAGGCCG GAACGGAAAC ACCTATTCGA 
CTGTCATTGG ATCAGCCATT AAAAGACGTC ACGGTTGTGG TGTCGGATGG TAGTGGACCG 
GTTTCTGAAA TCTTTGTCGA TGACTTAAAT GCCGGCGAAA AGATGGTTAA CTGGGATGGT 
AAAGACAAGT TAGGCAATGT CGCTGGAAGT GGTGAATATA CCTTAACCGT TTTTGGCTTA 
GATAAAGAAG GCGAGTTGCA GTCGATTAAA ACGATTGTCC CATCGAAGGT GAATTCAATT 
TCAATTAATG ATGATGGTAC TACGACGGCG ACTTTAGCAA CAGGAGAAAA AGTCAAAATC 
GATGATATCA GAGAAATCAG TTAA
 
Protein sequence
MATPAISSNN TDYMKALQQS TNGKSNAPDQ QLGQADFLRL LTTQLQNQDP NKPMDPTNFV 
TDLTQMSQLE ATTKMNQSML AMTTGLQNMQ VMQSASLIGK NVQAIGDTMS HEAGTETPIR 
LSLDQPLKDV TVVVSDGSGP VSEIFVDDLN AGEKMVNWDG KDKLGNVAGS GEYTLTVFGL 
DKEGELQSIK TIVPSKVNSI SINDDGTTTA TLATGEKVKI DDIREIS