Gene Tcr_1470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1470 
Symbol 
ID3761950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1589677 
End bp1590414 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content44% 
IMG OID637786201 
Producthypothetical protein 
Protein accessionYP_391736 
Protein GI78485811 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGTA TGCTTTATGT TTCGATGAGT GGCGCGAAAG AAGTGATGCT CTCGCAGGCG 
AATAATGCTA ACAATTTGGC CAATGCGAAT ACGGATGGGT TTAAACAAGA TTTTAACCAA
TTCCGAGCAC AGCATGTGCA AGGACCTGGT TGGAATTCTC GAACGTATTC ATTAGACGAA
AGACCGGCGA CGGATTTTGC GCCAGGAGCC GTGAAAGTGA CTGGTCGTGA CCTAGACATT
ATGACGAAAG AGAATGGTTT TTTAGCCATT CAAGCACCTG ATGGATCGGA AGCTTTAACG
CGCTCCGCCT CAATGCATCT GAACCCTGAA GGGGATTTGT TAGATGTACA TGGCAACCCA
GTTTTAAATG AAGGGGGTGC GCCCATTAAT ATCCCACCCG CCAAGTCCAT TCAAATTGGC
AGCGATGGCA CGATTTCATT TATTCCAGCC GATTCGACCA ATAACTTAGC GGTTGTTTTG
GATCAGGTAC GATTGGTTCA ACCGGATATT AAACAGCTCG AAAAAGGGCT GGATGGTTAT
ATTCGAAACA ATGGTGCCGA ATTAGAACAA GCGCCAATCA GAGTTGTGAG CGGCGCACTG
GAAAGCAGTA ATGTGAATAC CGTTGAAGCT TTGACGAATA TGATCGAGCT TTCTCGAAAA
TATGAAATGC AAATTAAGAT GATGAGCACG TCTAAAAATC ATGCCCAAAA ATCTGACAGC
ATTCTTAAGT TAACCTAA
 
Protein sequence
MNRMLYVSMS GAKEVMLSQA NNANNLANAN TDGFKQDFNQ FRAQHVQGPG WNSRTYSLDE 
RPATDFAPGA VKVTGRDLDI MTKENGFLAI QAPDGSEALT RSASMHLNPE GDLLDVHGNP
VLNEGGAPIN IPPAKSIQIG SDGTISFIPA DSTNNLAVVL DQVRLVQPDI KQLEKGLDGY
IRNNGAELEQ APIRVVSGAL ESSNVNTVEA LTNMIELSRK YEMQIKMMST SKNHAQKSDS
ILKLT