Gene Tcr_1468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1468 
Symbol 
ID3761948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1588075 
End bp1588827 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content43% 
IMG OID637786199 
Productflagellar L-ring protein 
Protein accessionYP_391734 
Protein GI78485809 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAGAA TTAACACAAA CACTCAAAAA AATAATAATA CAAAGTTTTC CAAGCTAATC 
TTGGGGGTAA TGGTTTCATC CATCGTTTTA AGTGGTTGTT CCGCGACACC GGAACGTATG
GAAAAATTTT CTTATGAACC GAATTATCCG ATGAATATTC CGAAAAAGAC AGTGCCTAAA
AATGGTTCTT TGTATCAGAG TGGTGATGCC ATTACGCTGT TTGATGATTC TCGAGCCCAC
AAGGTCGGCG ATATTATTAC GATCAACTTG GCAGAAAATT TTGATGCCAA GAAAAAAGAC
GAAGCGAAAT ACGATAAAAG TAATCAACAG AATTTTGGTT TAAATGGACA GGCGGCAGTC
GGTTCTAACG CCAGTGTCTT TGGCGGAAAT GTTTCCGTTC CTGGCTTGGG ATCAGGGATT
GGTATTGGGT ATGGCTCAGA TGGTAGCTTT GCCGGTAAAT CGGATGTTAA GCAAAAGTCG
AGCTTAAGCG GGTCCATTGC GGTGACAGTG GTGCAAGTGA TTTCAAACGG TAATTTGGTG
ATTCGAGGCG AAAAATGGAT CACCATTCAC GAAGGGGAAG AGGTTATTCG TTTTGCGGGC
ATCGTCCGAC CTCAAGATAT TCGGCCGGAC AATACCATCG ATTCTGAAAA GGTCGCTGAT
GTTCGCCTGA TTTATAAAGA TACTGGCATT TCCGGTGATA CCAATCGACC TGGTGCCATG
ACACAGTGGT TGCATAAGTA CTGGCCGCTT TAA
 
Protein sequence
MTRINTNTQK NNNTKFSKLI LGVMVSSIVL SGCSATPERM EKFSYEPNYP MNIPKKTVPK 
NGSLYQSGDA ITLFDDSRAH KVGDIITINL AENFDAKKKD EAKYDKSNQQ NFGLNGQAAV
GSNASVFGGN VSVPGLGSGI GIGYGSDGSF AGKSDVKQKS SLSGSIAVTV VQVISNGNLV
IRGEKWITIH EGEEVIRFAG IVRPQDIRPD NTIDSEKVAD VRLIYKDTGI SGDTNRPGAM
TQWLHKYWPL