Gene Tcr_1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1457 
Symbol 
ID3760804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1575475 
End bp1576698 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content46% 
IMG OID637786188 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_391723 
Protein GI78485798 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase
[TIGR03568] UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTAAAA AGGTCGCCAT CGTTACCGCA ACCCGTGCCG AATATGGTTT GTTGTCTAAC 
TTGATTAAAG CGGTTAACGC GCACCCTAAG TTCGATTGTC AGCTTCTGGT CACAGGAGCG
CATTTGGTTT CTGAACAAGG CCTAACGGTT GAGCACATTC GAGCGAGCGG TGTTGAGATT
GCGGCTGAAG TTCCAATTTT TTCGAAAACG ACGACAACTG ATAATGAAAA TGTGGTCTTG
TCGGACGCCA TCGCTGAAGC AACATCCGGT TTTGCACGGA CATTCGCACG TTTTAACCCC
GATTGTGTGG TGGTTTTGGG CGATCGTTAT GAATTGTTGG GGATTTGCTC GGCGGCTTTG
CTAGCACATA TTCCAATTGT GCATATTCAT GGAGGTGAAG TGACTGAAGG GGCCATGGAT
GAGGCCATTC GTCATGCGGT CACGAAAATG GCGCATTTGC ATTTTGTAGC AGCCGAGCCC
TATCGTCAGC GTGTGATTCA AATGGGTGAG CAACCACAAT GCGTTTTTAA TGTCGGCGCT
CCGGGGTTGG ATGTGATAAA AACAACGGAT TTGTTATCTA AAAAAGAGTT GAGTGATTTT
TTGGAAATGC GGTTAACATC GCCGCTTTTT TTAGTGACTT ATCACCCTGT CTCCTGGGGA
GAAACAGCGG GCATTACGGC GCTGCATAAT TTGTTTAAAG CCATTGAGCA GTTTCCGGAA
GCCACTGTCG TTTGGACGGC AGCCAATACC GATGCTACTG GAGCTGAGCT GAATCAACAC
GTAAAACAAT GGGTATCAAC CACTCAGATG AATGCAATAT TTGTCTCTTC TTTAGGATCC
CAGCGTTATT TAAGTTTGAT GAAAGTGTGC GATGTTGTGT TAGGAAATTC TTCCAGCGGC
ATTATTGAGG CACCTGCCAT GGGCGTCGCA ACAGTCAATA TTGGAGAACG GCAAACCGGC
CGTCTTCGAG CGCCATCTGT CATTGATTGT GGTGAGCAGC AGCAAGACAT TACACAGGCT
TTAGAGCAAA GTTTAGCGCC AGAGTTTAAA ACGTTAACGG CACAAAAAGT ATCCTGTTAT
GGCCAAGGTA ATAGTGCTAA AGAGATGGTA GAGCAACTGG AAAAAGCGCT GTTGTCTGAA
AGGGCCTGTT TGGGCGTGAA GTCTTTTTAT GATTTACCCT TGAATATAAA TGAAAGCATT
GACGAGAAGG GAGACACAAT ATGA
 
Protein sequence
MRKKVAIVTA TRAEYGLLSN LIKAVNAHPK FDCQLLVTGA HLVSEQGLTV EHIRASGVEI 
AAEVPIFSKT TTTDNENVVL SDAIAEATSG FARTFARFNP DCVVVLGDRY ELLGICSAAL
LAHIPIVHIH GGEVTEGAMD EAIRHAVTKM AHLHFVAAEP YRQRVIQMGE QPQCVFNVGA
PGLDVIKTTD LLSKKELSDF LEMRLTSPLF LVTYHPVSWG ETAGITALHN LFKAIEQFPE
ATVVWTAANT DATGAELNQH VKQWVSTTQM NAIFVSSLGS QRYLSLMKVC DVVLGNSSSG
IIEAPAMGVA TVNIGERQTG RLRAPSVIDC GEQQQDITQA LEQSLAPEFK TLTAQKVSCY
GQGNSAKEMV EQLEKALLSE RACLGVKSFY DLPLNINESI DEKGDTI