| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1453 |
|---|
| Symbol | |
|---|
| ID | 3760800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1570035 |
|---|
| End bp | 1570898 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637786184 |
|---|
| Product | flagellin-like |
|---|
| Protein accession | YP_391719 |
|---|
| Protein GI | 78485794 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.276413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATGG TTATTAATAC AAATATGGCT GCAATCAATG CAAATCGTAT TCTAAGTAAC
ACAACTATTG ATCAACAAAC AGCAATGGAG CGTTTGACAT CTGGTAAACG CATTAACGGT
GCAGCGGATG ACGCGGCGGG TCTTGCGATT ACAACCAAAA TGACAACCCA GGTAATGGGA
ACGGACATGG CGATTCGTAA CGCGAACGAC GGGATTGCTA AAATTCAAAC CGCAGATGGC
GCTTCAGAAG AAATCACAAA CATGTTGCAA CGTATGCGTG AGTTGGGCGT TCAAGCATTG
AACGGTACTT ACAGCACAGG TAACCGTACT CAAATGCAAG AAGAGTTTAG TGCGCTTCAA
GAAGAAATTG ATCGTATTGC TCAAACCACA AAATTTAACG GTGTTAACTT GTTGAACTCT
GCCGCGGTCG GCGCTTCAAC AGCGAAGGTT TTCCACGTTG GTTGGGAATC CGGTGTTAAC
AATAAGATCT CAATGAGTGT CTTGAACGTA GGTACCAGTG CATTGTCTGC CGGTGGTGTC
ACACTAGGTT CTTTGACGCT AACAAGTACA GCAACAGGAA CAACAGCGGC TTCCGCGGCG
GTTTCTAAGT TAGACGTTGT TATGTCGAAA ATGAATTTAC AACGTGCATC ATGGGGTGCG
CTACAGAACC GACTAGAATC AACGGTTTCT AACTTATCGA ATGTAAATGA AAACATCCAA
GGTGCACGTT CACGTATCGA AGATGCTGAC TTTGCAAAAG AAAGTGCGAA CTTAGCGCGT
ACACAAGTAC TGCAGCAAGC AGGGATGAGT ATGTTGTCCC AGGCTAACCA GCAGTCGCAA
AATGTTATGC AATTACTTCA GTAA
|
|---|
| Protein sequence | MAMVINTNMA AINANRILSN TTIDQQTAME RLTSGKRING AADDAAGLAI TTKMTTQVMG
TDMAIRNAND GIAKIQTADG ASEEITNMLQ RMRELGVQAL NGTYSTGNRT QMQEEFSALQ
EEIDRIAQTT KFNGVNLLNS AAVGASTAKV FHVGWESGVN NKISMSVLNV GTSALSAGGV
TLGSLTLTST ATGTTAASAA VSKLDVVMSK MNLQRASWGA LQNRLESTVS NLSNVNENIQ
GARSRIEDAD FAKESANLAR TQVLQQAGMS MLSQANQQSQ NVMQLLQ
|
|---|
| |