Gene Tcr_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1448 
Symbol 
ID3760795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1565109 
End bp1565543 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content36% 
IMG OID637786179 
Productflagellar protein FliS 
Protein accessionYP_391714 
Protein GI78485789 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1516] Flagellin-specific chaperone FliS 
TIGRFAM ID[TIGR00208] flagellar biosynthetic protein FliS 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00104689 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGA ATATGCGTAA TAAATTTGCA CAACAATATG CAAATAATTA TGTTGAAACG 
GCTGTTTCAG AAGCAACACC GCATAAATTG GTTGAGATGC TTTATGATGG TTTGGTCAAA 
CATTTAACCT TATCAAAGGT GTTCATCGAG CAACAAAAAT ATGAACAGAA ATCGGAGCAC 
ATTAATAAAT CTCTGGCGAT ATTAAATTCT CTGAGAGATG GTGTTGATCT TGAAAAGGGA 
GGCGAAGTCG CCGAAAATTT ATTTGGTTTA TATGACTACT GTTATCGAAC GATGATTGAG 
GTATCCGCTA AAAATGATAC CGCTCTCATT GATGAGGTGA TTGAACATAT TAAAACATTA 
AACGACGCTT GGAAGGCCAT GCCTGAAGAG ATTAAACGAT CTTCTAAAGA TCAGATCGAA 
AGAGAGAGTG CTTGA
 
Protein sequence
MDMNMRNKFA QQYANNYVET AVSEATPHKL VEMLYDGLVK HLTLSKVFIE QQKYEQKSEH 
INKSLAILNS LRDGVDLEKG GEVAENLFGL YDYCYRTMIE VSAKNDTALI DEVIEHIKTL 
NDAWKAMPEE IKRSSKDQIE RESA