Gene Tcr_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1443 
Symbol 
ID3760790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1560533 
End bp1560865 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content38% 
IMG OID637786174 
Productflagellar hook-basal body complex protein (FliE) 
Protein accessionYP_391709 
Protein GI78485784 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATT CGGTCGATAC ACAAAGCCTT ATGTTGCAGA TGAGAAGCTT GGCTGCTGAA 
GCAGCGTCTC AGTCTCAATC CGTTCAAAAG GTTGAAAAAG GTGCTCAAAG TGCAGAAAAT
TTTTCCGATT TACTCTCTCA ATCGGTTAAT GCCGTCGCAA CCGAACAAAA TAAATCATCA
GCCATGAAAA CTGCCTTTGA AAAAGGGGAG GATGTTGATT TAACAGAAGT AATGGTTCAA
GCACAAAAGG CAAGTTTGTC TTTCCAAGCA ATGACTCAAG TAAGAAATAA ACTGGTCGAA
GCTTATAAAG ATATTAAAAA CATGCCTATT TAA
 
Protein sequence
MSNSVDTQSL MLQMRSLAAE AASQSQSVQK VEKGAQSAEN FSDLLSQSVN AVATEQNKSS 
AMKTAFEKGE DVDLTEVMVQ AQKASLSFQA MTQVRNKLVE AYKDIKNMPI