Gene Tcr_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1438 
Symbol 
ID3761697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1555134 
End bp1555583 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content35% 
IMG OID637786169 
Productflagellar biosynthesis chaperone FliJ-like protein 
Protein accessionYP_391704 
Protein GI78485779 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2882] Flagellar biosynthesis chaperone 
TIGRFAM ID[TIGR02473] flagellar export protein FliJ 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATT CAAAAGTAAA ACGTTTTGAA ATGTTAGTTG AATTGGCTCA GGACGAGTTG 
GATAAGGCAC AAGAAACCTT TATTGCCGTT CGTCAGCAAC TAGAAAGTAG TCAAGAGCAA 
CTCGACTCTT TACAGGACTA CCATACTAAT CATTTGTCTA AAATTCATAA TGAAAAAGAA 
GTCACTACGG CTCAACTTCA AACAACCCAA GCATTTATTG ATAACGTTAA TAAAGCTATC 
CTGTCTCAGA AAGATCAAAT TACACAATTG ACACACGTTT TAGAAAAAGC ACAAGAAACC 
TGGATCGAAA AACGTGCTCG TCATCAATCT CTGAAAAACA TTCATTTAAA GTTAAAACGG 
GATGAACGCG TCAAACTTGA TAAGCAAGAG CAAAAAATGC TGGATGAATT AGCCTCTCAG 
CAATTTTTTT ATAGTAAATC TTCTGAATAA
 
Protein sequence
MANSKVKRFE MLVELAQDEL DKAQETFIAV RQQLESSQEQ LDSLQDYHTN HLSKIHNEKE 
VTTAQLQTTQ AFIDNVNKAI LSQKDQITQL THVLEKAQET WIEKRARHQS LKNIHLKLKR 
DERVKLDKQE QKMLDELASQ QFFYSKSSE