| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1428 |
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| Symbol | |
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| ID | 3761687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1541937 |
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| End bp | 1545134 |
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| Gene Length | 3198 bp |
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| Protein Length | 1065 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786160 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_391695 |
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| Protein GI | 78485770 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.905049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAACC GAATGATTGA TTGGGCGGTT ACTAACCGTT TGCTGGTGAT ACTCGCCCTT
ATTACACTGA CGGTCAGTGC TTTTTTTGTT ATCCCCAAAC TGAATCTCGA TGCCTTTCCA
GATGTTACCA ATGTGCAGGT ATCCGTTAAT ACTGAAGCTC CGGGGCTAGC TGCTGAAGAG
GTTGAGCAGC TTATTACCTA CCCTATTGAA GCCGTGATGT ATGCGTTGCC TGACGTTGAA
GAGGTACGCT CCATCTCCAA AACAGGCCTC TCCGGCGTCA CAGTAGTATT CAAGGAAGGC
ATGGATATCT ATTTTGCCCG ACAACTCGTG TTTGAACGGT TACAGTCTGC AAAGGAATTG
ATTCCTGACG GGGTGGGAAC TCCTGAGATG GGGCCGAATA CCTCAGGCCT AGGACAAGTT
TACCAATACC TGCTAATGGC CGAACCGGAT TCAGGCTTTG ATGCTATGGA ATTGCGTAGT
TTGAATGACT GGGTAGTAAA GCTATTGCTA CTTCCAGCGG AAGGGGTAAC TGATGTGCTT
TCTTTCGGTG GCGAAGTGCG TCAATATCAG GTTAACCTGA ATCCCTCGCG ATTGTTAGCC
TATGGCTTAA CACAAGATAG TGTCATGAAG ACTTTGGAAC AAAACAATAC CAATGTCGGT
GGTTGGTATA TGAGTCGTGG TCAAGAGCAA TTGGTCATTC GCGGGACAGG ATGGTTTGAT
CATGGTGAAC TTGGTTTGAA GCAGATTCGC CAGGTGCCTT TGAAAACGGT GGATGGCACC
ACTGTTACTG TTTCAGATGT CGCAGAAGTG GTACTAGGGA GAGAAATCCG CCAGGGTGCC
GTTACAATGA CTCGTAAAAA TGAGGATGGA AAAGTCGAAA ATCTTGGCGA AGTCGTGTCC
GGTATTGTGC TCAAGCGTAT GGGGGCTAAC ACGAAAGTTA CAATAGATGC AGTTAATGAG
CGTTTTGAAC GCATCAATCA AGCATTGCCA GAAGGAGTCC GTTTTGAGGT GTTCTACGAT
CAGGCAAATT TAATTACAGC AGCTGTCGAG ACAGTGGTCA ATGCGCTTTT ACTGGCATTT
GTTTTTATTG TCGTGATTCT AGCACTGTTC TTGATGAATT TAAGTGCTAC GTTTTTGGTA
TTGATCTCCA TTCCCATCTC CATCGGTATC GCCTTGATGG TAATGTCATG GTTTGGTTTA
TCAGCTAATT TGATGTCTCT TGGAGGGATT GCGGTAGCTA TTGGGATGTT AGTTGATGGC
TCCGTCGTCA TGGTTGAGAA CATGTTTAAA CACTTGTCTC GCCCAGATGC TGAGCATGAT
GCCGAAAGAG CATTGCGTGT TGGATCCACA GATAGAGATC CAGTCCGCGC CTGTGGTGAC
CATCATGGTA TCGCCTTAAG ATTGCAGGAA GCCGGTAAAG AGGTGGCGCG ACCTATCTTT
TTTGCCACGG CCATTATCTT GGTTGTGTTC ATGCCGCTTT TCAGTTTTGA GGGGGTTGAA
GCTAAATTGT TTCAGCCTAT GGCTATCAGT ATTATGTTGG CTATGCTTTC GGCAGTTTTA
GTGGCCTTGA TTATTGTGCC CGCATTAGCG ACATATCTTT TTCGTAAGGG CGTACGCCAA
CGCGAGAGCT TTTTGTTAAA GCCAATCGAT TTTGTCTATC GCAAAAGTTT AACTTGGGCT
ATGAGGCATA GCAAAGTTGT TGTAGGTATA GCTGTCTTCA TGGTAATTTC TGCGGCACTT
GTCATACCTC GCCTAGGAAC CGAATTCGTG CCTGAACTTG AAGAAGGAAC TATCAACTTG
CGTGTCACTT TGGCTCCATC GTCTAGTTTA GAAACTGCAC TGCAAGTGGC CCCTAAGCTG
GAGGCAATGC TAATGGAGTT TCCTGAGGTT ACTTATGCAC TGTCGCGTAT TGGTCGCGCC
GAAATAGGCG GAGATCCTGA GCCAGTAAAC AACATTGAAA TTTATATCGG GCTCAAACCT
ATAAAAGAGT GGCAAACTGC AAAAAATCGT TATGAATTGC AGGCCTTGAT GGAGCAAAAA
CTTGAACGAC ATCCCGGTTT GCTTTTCAAT TTCTCTCAAC CAATTGCAAC CCGTGTTGAT
GAATTGCTTT CAGGTGTCAA GGCGCAATTG GCCATCAAGC TTTTTGGTCC CGAACTTGAT
GTGCTCGCAG ATAAAGGACA AGCAATAGAG AGCGTAGTTA AAAATATCGA AGGCGCTAGA
GATGTAGCTA TGGAGCAAAT TGTTGGAGAA TCTCAATTAG TAGTAAAACC GGATCGTCGC
GCTTTATCAC GCTATGGACT GAACGTCTCT GACGTAATGG AGCTTGTACG TGAAGGTCTG
GGAGGCGCTA GTGCTGGACA AATCATCAAT GGCAACGAGC GTTATGACAT CTATGTCCGG
CTGGCTGAGC GCTTCCGTGA AGACCGTGAA ACCATTGCAG ACCTTCGTTT ACAAGCTCCA
ACAGGTGCTT GGGTTCGCCT TGAGGATGTG GCCGATGTCA ATATTGCTTC AGGACCTCCT
CAGGTTCGTC GTGATGACGT ACAGCGACGT GTGGTTATTC AGGCTAATGT TCAGGGGCGA
GACATGGGAA GCGTAGTCTC AGATATTCGT CAGGCAGTTG CTGAACAAGT CGAACTTCCG
GCTGGGTATT CTGTCGATAT CGGTGGCCAA TTTGAGAGCC AGCAACGAGC GCAAAAGCGT
TTATCACTGG TTGTACCGGT TTCTCTGGGA TTAATCGCCT TGTTGCTTTA TTTCGCTTTT
GCTTCGGTTG GTCAGGCTAT GTTAATTCTG GTAAATGTGC CGTTAGCCGT TATTGGTGGC
GTTTTTGCAC TTTGGTTTTC TGGCCAATAC TTGTCTGTAC CAGGTTCTGT AGGATTCATT
ACCCTCTTTG GGGTAGCCGT ATTAAATGGT GTCGTTATGG TAGAAAGTAT CAATCAACGA
ATTATAGATG GTCTATCGGT TTCCGATGCG GTATTTGATG GCGCTACTTC AAGGCTGAGG
CCAGTATTAA TGACCGCCAT TACTTCAGCA CTTGGTTTGA TGCCTATGCT ACTTTCCAGT
GGTGTTGGTG CAGAAATCCA AAAACCCTTG GCAACAGTAA TCGTGGGCGG TTTAATAACA
GCCACATTTT TGACATTGTT TGTGTTGCCA GTGTTATTTG CTTGGTTTTC AAAAGGAAAA
ATAAAAGATA TGGCTTAA
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| Protein sequence | MFNRMIDWAV TNRLLVILAL ITLTVSAFFV IPKLNLDAFP DVTNVQVSVN TEAPGLAAEE
VEQLITYPIE AVMYALPDVE EVRSISKTGL SGVTVVFKEG MDIYFARQLV FERLQSAKEL
IPDGVGTPEM GPNTSGLGQV YQYLLMAEPD SGFDAMELRS LNDWVVKLLL LPAEGVTDVL
SFGGEVRQYQ VNLNPSRLLA YGLTQDSVMK TLEQNNTNVG GWYMSRGQEQ LVIRGTGWFD
HGELGLKQIR QVPLKTVDGT TVTVSDVAEV VLGREIRQGA VTMTRKNEDG KVENLGEVVS
GIVLKRMGAN TKVTIDAVNE RFERINQALP EGVRFEVFYD QANLITAAVE TVVNALLLAF
VFIVVILALF LMNLSATFLV LISIPISIGI ALMVMSWFGL SANLMSLGGI AVAIGMLVDG
SVVMVENMFK HLSRPDAEHD AERALRVGST DRDPVRACGD HHGIALRLQE AGKEVARPIF
FATAIILVVF MPLFSFEGVE AKLFQPMAIS IMLAMLSAVL VALIIVPALA TYLFRKGVRQ
RESFLLKPID FVYRKSLTWA MRHSKVVVGI AVFMVISAAL VIPRLGTEFV PELEEGTINL
RVTLAPSSSL ETALQVAPKL EAMLMEFPEV TYALSRIGRA EIGGDPEPVN NIEIYIGLKP
IKEWQTAKNR YELQALMEQK LERHPGLLFN FSQPIATRVD ELLSGVKAQL AIKLFGPELD
VLADKGQAIE SVVKNIEGAR DVAMEQIVGE SQLVVKPDRR ALSRYGLNVS DVMELVREGL
GGASAGQIIN GNERYDIYVR LAERFREDRE TIADLRLQAP TGAWVRLEDV ADVNIASGPP
QVRRDDVQRR VVIQANVQGR DMGSVVSDIR QAVAEQVELP AGYSVDIGGQ FESQQRAQKR
LSLVVPVSLG LIALLLYFAF ASVGQAMLIL VNVPLAVIGG VFALWFSGQY LSVPGSVGFI
TLFGVAVLNG VVMVESINQR IIDGLSVSDA VFDGATSRLR PVLMTAITSA LGLMPMLLSS
GVGAEIQKPL ATVIVGGLIT ATFLTLFVLP VLFAWFSKGK IKDMA
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