| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1426 |
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| Symbol | |
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| ID | 3761685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1539382 |
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| End bp | 1540623 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637786158 |
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| Product | efflux family outer membrane protein |
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| Protein accession | YP_391693 |
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| Protein GI | 78485768 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAAT TTTCTATTTC TTATATGATC GGTGTCGTTC TGTATTTTTC TTCGCTCTCT
GTATATGCAC AATCAACTGA TTGGCAATAC TGGTTGAGCG CTCAAATACA AAAACACCCA
GACATGATCG CAGCTAGAGA ACAACTACTT GGCAATAACG CCAAAGCAGA TGCTATAGAA
CAACCACTTT ACAATCCTGA ACTGTCTTCA GAACTAGAAC GTAATGGAAA ACAAAACAAC
TACCAACTAG GCATTAGACA GACCATTGAT TGGTGGGATA GAAGAGAAGT CAGTCGATTA
AAATCAGGGT ATATACGAAA CGCATCAGAA GCGCTTTACC AGCAGCAAGT TTTACAAGCA
ACCGCCGAAG CTATGGCTAC GTTGGTTGAG TGGCGTGCCG CTAAAAATGT CGCTGCCATT
GCAAAAAAAC AATACCAGCA GCTTCAAACT CAACTCGAAC TGGTGCAAAA ACGACAGCGG
CTAGGAGACT TGGGTAGTAT TGATGCTGAA CTCACCTTTC TCTCTCTTTC GCAACAATTA
GCGCAAGTCG CGGAAGCAAA GGTTGTCTTA AAAAAATCTG AAGCTAAGGC TCGTGAGCTA
ATCCCTAGCT GGACACCAAA ACTTGGTGGA GTTCCCCAAG ATTTCTGGCC ATCTTCACTT
AGTTCTAACT CTAATCAGGA TCTTCTAAAA CACCCTCGCG TAGCAAGCGC TTATGCCCGT
TGGCAGTCGC AAAAAGAAGA AGCTGAGTTG GCACGTCGCA CTGCAAAAGC TGACCCTACA
GTTGGAATTA AGACTGGTCA AGATGGTGGA AAAAACGTTA TAGGGTTGAC TTTATCCATT
CCCCTTAACG TGCGCAATGA TTTCAGTGCA GAAACACGTG CCGCTGAACG CGCAGGTCTT
GAAGAAAAAG CTCGCTTTCA AAGCATTTAC CGTAAACAGC GTTTCAGCTG GCAAGCTGCT
TATTCCGTTT GGAAGAGTTT TGATCAGCAA TACCAACGCT GGAAAAAACT AGCTCAAGGT
CGGGTCGAGA AAAGTGCTGA ACTGCTTGAA CGACAATGGA ATAGTCGGGA TTTATCAACA
ACAGATTATC TGCTGGCTTT AAATCAACGC GCTGAAAGCC TAATAGCAGG CATTGAACTG
GAAAAACAGA CGCAACTTGC CCTTCTTGAT GCACTTAAGC AATCTGGTCT TTTATTGCAA
GCCAAAAATG CTGAACACCA AATTACAGGA ATACGAAAAT GA
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| Protein sequence | MKKFSISYMI GVVLYFSSLS VYAQSTDWQY WLSAQIQKHP DMIAAREQLL GNNAKADAIE
QPLYNPELSS ELERNGKQNN YQLGIRQTID WWDRREVSRL KSGYIRNASE ALYQQQVLQA
TAEAMATLVE WRAAKNVAAI AKKQYQQLQT QLELVQKRQR LGDLGSIDAE LTFLSLSQQL
AQVAEAKVVL KKSEAKAREL IPSWTPKLGG VPQDFWPSSL SSNSNQDLLK HPRVASAYAR
WQSQKEEAEL ARRTAKADPT VGIKTGQDGG KNVIGLTLSI PLNVRNDFSA ETRAAERAGL
EEKARFQSIY RKQRFSWQAA YSVWKSFDQQ YQRWKKLAQG RVEKSAELLE RQWNSRDLST
TDYLLALNQR AESLIAGIEL EKQTQLALLD ALKQSGLLLQ AKNAEHQITG IRK
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