Gene Tcr_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1420 
Symbol 
ID3761679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1533501 
End bp1534220 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content42% 
IMG OID637786153 
Producthypothetical protein 
Protein accessionYP_391688 
Protein GI78485763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAG AAACTAACGA AGTTATTGAA ACTGCCAAGG CTACTCAAGA AGTCGCAAAA 
ACGACATCCA AGACTTTGGA AACCGCTGAG AAGCTAGGCG GCTTTATATC CAAATATATT 
GGTGGACCAC TAGAGCAAGC AGTTGGCATA TTTGAGGATA AGCTGAAATA CATTCGCTGG 
GAAAGGCAAC AGCGCTTGTT CAAACGAGCA CAAGAGTTTA TCGAAAATGA AGGCGCCGAT 
ATAACAAGAC CTTTGCCAAT TAAGCATGCT ATTCCGTTAC TTTCAGCAGC CTCATTGGAA 
GAAGACGATT ATCTCCAGGA TATATGGGCG AGGCTCCTTG TAAATTTCAC AATGGATACC 
AGCTCTGTAG AAGCCACACG AACTTACATC GATATATTGG AGCGACTTTC TTCTCTGGAA 
GTAAAAGTAA TTAATGCGGT GTACATAAAT GACTATGCTT CAATGCATCA CAATGGCGTC 
GCAACTAGAG AGCTGCCACA TAAGGCAATA GTTTTGCCAG AGGAACCTGA TGAAGATACA 
AGGGAAGCAC TGAAAATTGA GCCTTCTGAA GATGTTAAGC TGGCTCTTGC TAATTTAGAT 
AGATTGGGCA TAGTGTCCGT TGGACGATCT ATGGGTGGTG GCCAATTGTT TGGTTCGTTA 
AATCCAACAC TATTAGGTAA AGCCTTTTTT GAAGCGTGTA CATTGCCTAG TGAAAAATGA
 
Protein sequence
MTKETNEVIE TAKATQEVAK TTSKTLETAE KLGGFISKYI GGPLEQAVGI FEDKLKYIRW 
ERQQRLFKRA QEFIENEGAD ITRPLPIKHA IPLLSAASLE EDDYLQDIWA RLLVNFTMDT 
SSVEATRTYI DILERLSSLE VKVINAVYIN DYASMHHNGV ATRELPHKAI VLPEEPDEDT 
REALKIEPSE DVKLALANLD RLGIVSVGRS MGGGQLFGSL NPTLLGKAFF EACTLPSEK