| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1414 |
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| Symbol | |
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| ID | 3760781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1527289 |
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| End bp | 1528614 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637786147 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_391682 |
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| Protein GI | 78485757 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCTC AATCACTGGC CATTTTAATG GTCATTACAC TTTTTGTCCT CATTCTAGCG
GGTGTACCTG TTGCTTTTTC AATTGTCGCA GCGGGAATAA GTTTTGGATT AATTGGAATG
GGATTTGATT TATTTCACCT GATCCCTGCA CGTATTTTTG GTGTTATTAC AAACTACACT
CTTCTTGCAA TCCCTTTATT TGTTTTCATG GGGGTGATGT TAGAAAAATC CCGGCTTGCT
GAAAAAATGC TAGATGTCCT AGGTCTTATA GCGGGAAGAA TGCCAGGAGG AATGGCTATT
TCCATTATTG TTGTGGGGGT TCTCATGGGG GCTTCGACAG GCATTGTGGG GGCAACGGTT
GTGACTTTGA GCATGATTGC ACTTCCGACA CTGTTGCGCC GCAATTACAG TCATTCTGTT
GCTTGTGGAA CAATTTGCGC TTCTGGAACA CTAGGACAAA TTTTACCGCC TAGTTTGGTA
CTGATATTAC TCGCAGATAT TACTGGGGAA GCCATAGGGC CGCTTTTTGC CGCCGCTTTG
ATTCCAGGTC TACTGCTGGC GACAATGTAT GTTTTATATA TTCTGTATCT TGCTTGGAGG
TCGCCAGAAA AGGTTCCGCC TATTGATTTG GAAGAAAGAC AAAGCTACTC ACGTCAGGAT
TTATGGATTC AATTCATCAA ATCTGTTGCC CCGCCATTTA TTTTGATATT CGCTGTTTTG
GGATCAATTA TTGGGGGTGT TGCTGCGCCA ACAGAAGCGG CATCAATGGG GGCCTTAGGT
GCTTTGTTAA TTGTTTTCTT GAGTAAGAGA ATGAGTTTGG GTGTATTAAA CGAAACCTTA
CGCGAAACGT TAAAAATAAC AGGCATGATT ATGTTTGTTC TTATCGCCGC CCAGATATTT
GGATTGAGCT TTAGAGGGCT TGATGGGGAT TATTTAATTG AAGATCTATT TTCAGTCATT
CCTGGCGGTG AGTGGGGTGC AATATTATTT ATGATGGTAC TTCTCCTTGT TCTAGGCTTC
TTCTTAGAAT GGATAGAGAT TTCTTATATT GTATTGCCTT TGATGTTACC TATTTTTCAT
GCATTGGGCA TTGATATGGT CTGGCTGGCG ATCTTAGTGG CGCTTAATTT GCAGACTTCA
TTTTTAACAC CGCCTTTTGG CTGGTCATTG TTTTTCTTGA AAGGGGTCGC TCCGCCTGAA
ATAAAGACAG TAAGTATTTA TAAGGGCGTT CTTCCATTCA TCGTAATGCA AATCATCGTT
ATAGGCCTAG TTATGATTTT CCCTGATATC GCATTATGGC TACCTAAAGC CATTGGTTGG
AGTTAA
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| Protein sequence | MEPQSLAILM VITLFVLILA GVPVAFSIVA AGISFGLIGM GFDLFHLIPA RIFGVITNYT
LLAIPLFVFM GVMLEKSRLA EKMLDVLGLI AGRMPGGMAI SIIVVGVLMG ASTGIVGATV
VTLSMIALPT LLRRNYSHSV ACGTICASGT LGQILPPSLV LILLADITGE AIGPLFAAAL
IPGLLLATMY VLYILYLAWR SPEKVPPIDL EERQSYSRQD LWIQFIKSVA PPFILIFAVL
GSIIGGVAAP TEAASMGALG ALLIVFLSKR MSLGVLNETL RETLKITGMI MFVLIAAQIF
GLSFRGLDGD YLIEDLFSVI PGGEWGAILF MMVLLLVLGF FLEWIEISYI VLPLMLPIFH
ALGIDMVWLA ILVALNLQTS FLTPPFGWSL FFLKGVAPPE IKTVSIYKGV LPFIVMQIIV
IGLVMIFPDI ALWLPKAIGW S
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