Gene Tcr_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1410 
Symbol 
ID3760777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1521287 
End bp1522477 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content37% 
IMG OID637786144 
ProductPhage integrase 
Protein accessionYP_391679 
Protein GI78485754 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAACA AACTTTCAGA TGTGCAGATA AGAAAGGCTG TTCACCCGTC TACTAAGAGT 
CTGTCTGATG GTAAAGGTCT TAGCATTGAA ATTATGCCAA AGGCGAAACG ATTCAAGTTC
AGATACCAGC GACCAGTGAA CAAAAAAATA AATAACCTTG TCTTAGGTTA CTATCCTAGT
ATGTCATTAA AAGCTGCTAG AGAAATAGCA CAGCAATATC GAGAGCTTTT AAAGAAAGGC
ATTGACCCAA AATATCAAAC ATCATCAGAA AAGGTTGATT TCGATCACAT TATCCAGCTT
TATTTAAAAA AAGGAAAAGC CGACTGGTCA GAAAAACATT TCAACACTAC AAAAGGTCGA
TATGAAAATT TCCTTAAAAA TCCTTTTGGT AATAGAGATG CAGCCCAAAT TACTTCTTTT
GATATATATA ACTTACTGGA ATCAGTAGCA CAATCAGGAA GCTATGGAAC CGCAGAAAAG
TTAAGCTATA TAATTTCTGG CGCATACTCC CAGGCTGCAA TACTTGGAAT GGTAAAATTC
AATCCTGCGG CTGGAGTTAT GAAACAGGTG ACTAAGACCA AAAAAACTCA ACAAATGCCA
CACTTTAACC TTACTCGCAA AGGTGAATCA GAAAGGCTTG GAAGGTTTTT AAATGATATT
AAAGCACTCA ATAAAACAAA TATTGCAGTC AAGACAGCAT TGCTTTTATC TCCCCTACTC
TTTATGCGTT CGGGCTCTCT CGCATCTTTA AAACTAGAAT CCTATGACAA GGATAATAAA
TGGCTTTTGA TTAATGCAGA AGATATGAAA AAAGACCACT CTGACTTTAT CGTTCCTTTA
AGCACGCAAG CTATAAACCT CCTTGAAACA CTTATTGCCG CCACAAAACC TAAAATTTAT
GTATTTGAGA GCAGAGCAAG TAAGCTTGGA CACATAAGAA TAGAGGCCAT TAACAAAGCA
AAATCACGAT CTGGATGGCG GTTTGATGAC GTGACGATAC ACGGATTAAG ACATACAGCA
ACAACATATT TAACTGAAAT TGGCTTTGAT TACGAAGTTA CAGAAATGCA ACTTCACCAT
AAACTTGTTG GTGTGCGGGG AATATACAAT AAAGCAATGC ATCTGGATAA ACGCAGAGAA
ATGATGCAAA AATGGGCAGA TTATTTGGAT AATTTGAGAA ACGGCATATA A
 
Protein sequence
MINKLSDVQI RKAVHPSTKS LSDGKGLSIE IMPKAKRFKF RYQRPVNKKI NNLVLGYYPS 
MSLKAAREIA QQYRELLKKG IDPKYQTSSE KVDFDHIIQL YLKKGKADWS EKHFNTTKGR
YENFLKNPFG NRDAAQITSF DIYNLLESVA QSGSYGTAEK LSYIISGAYS QAAILGMVKF
NPAAGVMKQV TKTKKTQQMP HFNLTRKGES ERLGRFLNDI KALNKTNIAV KTALLLSPLL
FMRSGSLASL KLESYDKDNK WLLINAEDMK KDHSDFIVPL STQAINLLET LIAATKPKIY
VFESRASKLG HIRIEAINKA KSRSGWRFDD VTIHGLRHTA TTYLTEIGFD YEVTEMQLHH
KLVGVRGIYN KAMHLDKRRE MMQKWADYLD NLRNGI