Gene Tcr_1408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1408 
Symbol 
ID3760774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1519686 
End bp1520117 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content38% 
IMG OID637786142 
Productcyclase/dehydrase 
Protein accessionYP_391677 
Protein GI78485752 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TCTCACGCTC AGCGTTATTA CCGTATTCTG CGGAATCTAT TTTTAATTTG 
GTTAACGATG TAGCGTCTTA TCCTGATTTT TTGCCTTGGT GCGGAGGCGC GGAAGTGGTT
GAAGAATCGG AAGACAGAAT GGTGGCCAGT ATTCTAATTG CCAAAGCGGG TATCAAACAG
TCTTTTACAA CTCAAAACTT TTTGAAAAAG CCGGAATCAA TTGAAATGAA CTTGGTTGAT
GGTCCATTTA AAAGTTTATT CGGTGTGTGG CAGTTTAAAC ATTTAGATGA AAACGCTTGT
AAAATCACAC TGGATATTGA GTTTGAAATC AGTAATTCTT TTTTGAATGC AGCCATTGGC
GCTTTGTTTG AACAAATTGT TTCAACGTTG GTCCAGTCTT TTTGTGATCG AGCTAAACAG
GTATATGGTT AA
 
Protein sequence
MKKISRSALL PYSAESIFNL VNDVASYPDF LPWCGGAEVV EESEDRMVAS ILIAKAGIKQ 
SFTTQNFLKK PESIEMNLVD GPFKSLFGVW QFKHLDENAC KITLDIEFEI SNSFLNAAIG
ALFEQIVSTL VQSFCDRAKQ VYG