Gene Tcr_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1405 
Symbol 
ID3760771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1518569 
End bp1518982 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content37% 
IMG OID637786139 
Productferric uptake regulator family protein 
Protein accessionYP_391674 
Protein GI78485749 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGTG CTGATTTAAA AAAAGTAGGT TTAAAAGTCA CCCTGCCACG GTTAAAAGTT 
TTAGAAATCT TAGAACAAGA AGGTGAAGAG CATCATCTGA CCGCTGAAGA TGTTTATAAG
ATATTAATCG AGCAAGGCGA AGAAGTCGGT TTAGCCACTG TTTATCGTGT TTTGACGCAG
TTTGAACAGG CGGGTATTGT AAGACGACTG AATTTTGAAA ATAATATTTC TGTTTTTGAA
TTGGATACTG GAGATAACCA CGATCACTTG GTTTGTGTTA AAACGGGCCG TGTTAAGGAA
TTTGTTGATC CGATTATTGA AGAACGAATT AAAGAGATTG CAAAAGAAAA GGGTTATGAG
TTATCCGCTC ATAGTTTGGT TATCTACGGC ACTCTAACGG ACGATGTAAA ATAA
 
Protein sequence
MSSADLKKVG LKVTLPRLKV LEILEQEGEE HHLTAEDVYK ILIEQGEEVG LATVYRVLTQ 
FEQAGIVRRL NFENNISVFE LDTGDNHDHL VCVKTGRVKE FVDPIIEERI KEIAKEKGYE
LSAHSLVIYG TLTDDVK