Gene Tcr_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1397 
Symbol 
ID3762033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1510363 
End bp1510824 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content44% 
IMG OID637786131 
Productriboflavin synthase 
Protein accessionYP_391666 
Protein GI78485741 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCA TCGAAGGAAA TTTAACAGCA CAGGGCTTAA AAGTAGGGCT GGTTATTGGG 
CGTTTTAATA GCTTTATTGT GGACAGTCTT GTTAAAGGGG CAATTGATAC CATTGTTCGT 
CATGGCGGGT CGGAAGACAA CATTGAGCAA GTATTGGTGC CTGGTGCTTT TGAAATTCCA 
ATTGTTGCCC AGAAAATGGC TGCCTCAGGA AAATATGATG CCATTGTTGC ATTAGGCGCG 
GTTATTCGCG GTGGCACGCC ACACTTTGAT TATGTGGCCG GTGAGTGCGT TAAAGGTATT 
GGTCAAGTCG CGTTGAATAG TGGTGTTCCG GTGTCCTTTG GCGTGTTAAC CGTTGATACG 
ATTGATCAAG CCATTGAACG AGCGGGAACT AAAGCCGGAA ACAAAGGCGA AGAATGTACT 
TTAGCAGCGA TTGAAACTGC AAATGTTTTA AAACAAATTT AA
 
Protein sequence
MKIIEGNLTA QGLKVGLVIG RFNSFIVDSL VKGAIDTIVR HGGSEDNIEQ VLVPGAFEIP 
IVAQKMAASG KYDAIVALGA VIRGGTPHFD YVAGECVKGI GQVALNSGVP VSFGVLTVDT 
IDQAIERAGT KAGNKGEECT LAAIETANVL KQI