| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1395 |
|---|
| Symbol | |
|---|
| ID | 3762031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 1508808 |
|---|
| End bp | 1509776 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637786129 |
|---|
| Product | thiamine-monophosphate kinase |
|---|
| Protein accession | YP_391664 |
|---|
| Protein GI | 78485739 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0611] Thiamine monophosphate kinase |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACACG AATTTGATGT GATTGAAACT TTCTTTAAGC CTTTATCCAG CGTTGCATCG
GTCGATGAAA TTGGGATCGG GGACGATGGT GCAGTTCTGT CTTGTCTGGC TGGAAACCAG
CTGGTGGTGG TGACTGATAC GCTTGTAGAA GGGGTGCATT TTCCGGTCAA GACGTCTGCC
TATAATATTG CCTGGAAAGC ATTAGCCGTT AATTTGAGTG ATTTAGCGGC GATGGGGGCA
ACCCCCGCCT TTTATTCATT GGCGCTCAGT TTGCCACCTG AAAAAAATAA CCAGGCCTGG
CTGGAATTGT TTGCCGGCGG ACTTAAGCAG TTAGCCAGTT TGTATAATAT TCCTTTGGTG
GGGGGTGATA CGACTCGATC CGATCGTTTG ACCATCACGA TTACCGCACA AGGATGGGTG
GAAACCGGAA ACGCTATTTT ACGCAAAGGA GCGCAACCGG ACGATTTGAT TTATGTTTCA
GGCGTGTTGG GAGAGGGTGG ACTGGGTTTA AAAGCGGTTC AGCAGCATTG GGATGAAGCC
TCTTATGCGT CAGCCATACA AAAACTCAAT CAACCTTCTC CACAAGTGAC CCTTGGGTAT
TATCTTAAAG GGCTTGCAAC CAGTGCCATT GATGTGTCTG ATGGGCTGTT AGCTGACTTA
AAACATATTT TGTCATCATC ACAAGTCAGT GCGTGGGTGG ACGTGGATTT GATTCCTGTT
TCGGACAGTA TGCGGACCTA TCTTCAGCAA TCCAATGATT GGTCATTACC GTTGATTGCC
GGAGACGATT ATGAGTTGTG TTTTACAGTG CACCCTGACA ATCAAGCATC CGTTCAAGAT
CTTGCAAAGA CCTTAGGGGT TTCATTAACG AAAATCGGGC AAATCGTAGC TGGTGAAGGC
GATGTGCAGT TAAAAAATGC TCCTGAAAAT CAGGCGCATT TACAGTCTCT TGGGTTTGAA
CACTTCTAA
|
|---|
| Protein sequence | MAHEFDVIET FFKPLSSVAS VDEIGIGDDG AVLSCLAGNQ LVVVTDTLVE GVHFPVKTSA
YNIAWKALAV NLSDLAAMGA TPAFYSLALS LPPEKNNQAW LELFAGGLKQ LASLYNIPLV
GGDTTRSDRL TITITAQGWV ETGNAILRKG AQPDDLIYVS GVLGEGGLGL KAVQQHWDEA
SYASAIQKLN QPSPQVTLGY YLKGLATSAI DVSDGLLADL KHILSSSQVS AWVDVDLIPV
SDSMRTYLQQ SNDWSLPLIA GDDYELCFTV HPDNQASVQD LAKTLGVSLT KIGQIVAGEG
DVQLKNAPEN QAHLQSLGFE HF
|
|---|
| |