Gene Tcr_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1389 
Symbol 
ID3762025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1502960 
End bp1503337 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content40% 
IMG OID637786123 
Productputative 6-pyruvoyl tetrahydropterin synthase 
Protein accessionYP_391658 
Protein GI78485733 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCAAC AATTCGTTTT AAAAACTTTA CTCGATTTTG CTTCTGCTCA TAGCCTAAGA 
GGTTATCCGG GCGACTGTGC AAAACTGCAT GGACACAACT GGAAAATTGA AGTTCAGGTC
GTCGGAGACA AGCTAAACGA CATTGGCATG CTGGTTGATT TCAAAGAAAT CAAACGCCAT
GCAAAAGAAG TCATTTCTGA ACTGGATCAT ACCTTTTTGA ATGATCACCC ACACTTCAAA
GAAAAAAACC CCACTGCAGA AAACATTGCT GAATATATTT ATAAGCAAAT ACAACAACGC
ATTCAGTCCT CAACCGTTAA GATGCACAGC TTAACCGTTT GGGAAAATGA CCGAAATTGC
GTCATTTACA GTGAGTAA
 
Protein sequence
MAQQFVLKTL LDFASAHSLR GYPGDCAKLH GHNWKIEVQV VGDKLNDIGM LVDFKEIKRH 
AKEVISELDH TFLNDHPHFK EKNPTAENIA EYIYKQIQQR IQSSTVKMHS LTVWENDRNC
VIYSE