| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1377 |
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| Symbol | |
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| ID | 3760763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1491513 |
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| End bp | 1492748 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637786111 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_391646 |
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| Protein GI | 78485721 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTTT TGAAACATTA TACGTGGTTG TTAGGACTGA CCGCTTTTGC GGTATGGCAA
ATGCCGAATA TCCTGACGTG GCCACTCAGT ACTCAGAAAT TATTACCCTG GCTGCCCTAT
GTTATTGCGG GCCTTGGGGT GTTTGTCGGC ATCTTTTTGA ATCGTTTACA GCCGATTCTG
ATTTTACTGA GTTTGGTCTG TTTTAACATT GGTATGCAAT ACTTTATCCC GGCTGGGTCG
ACCGGCTTGT CTGCGGTAAC TTTGTTTCCC GTGTTAGCGA TATTGCTGCC GCTCAACTTA
CTGCTCTGGT TGCTTTTCCC TGAACGCGGC ATTCACGATA AGGTGTATAC AATATTCCAA
TTGGCTTTGC TGGTCGGACA AGTCTATTTG GTTTACTGGG TGATGGAAAA CCTGCCTTTA
ACGTATTGGC AGTGGATTTC TCAAAACATT AGCATTGACG GGCTTAACTT ATCAACGGCC
GCTTTAATTG CGATGGTATC CGTTTGGCTG ATTTTAATGC TGCGAAACGC TTTGTTGAGC
CAACCTAAAG TACTTGATCG AACGGTGGTG TTTGTCCTGT TTTTAATGGG ATTCGGTTTG
AATGCCTTTT ATCAGTTTGG TTCCATTGCC TGGGTATCGT CGTTTGCAGC GACGATGCTG
TTATTATCGT TGATTTTTGA TGCTCATCAC ATTGCGTATA CCGACCAATT AACGGGGTTA
AATGGTCGTC GTGCTTTGTT GGAATCTTTC TTGGGACTGG GTCGAAAATA CAGCATTGCC
ATGATGGATA TCGATCACTT CAAATCGTTT AACGATACTT ACGGGCATGA TGTTGGGGAC
GCGGTGTTAA GAACGGTCGC CTATGAACTT TCTTTAATCT CAACCGGTCA AGTTTATCGT
TATGGTGGAG AAGAGTTCAC TGTTGTGTTT AAAGGTAAAC AAGCTCAGCA GGTGAAGCCC
GCATTGGAAG CCGTTCGATA TGCGATTGAA AACCGCGTCT TAGAGGTTGA AAAACAAGGG
CAGCCGGTTG AAACCAAGGT AACAGTCAGT TTTGGTTTGG CCGAGCGTAA TGATCAATTT
AAAAAGCCGG AAGAGGTGAT GAAAGCCGCA GATGAGGCTT TGTATCAAGC CAAAAAATCC
GGACGAAACC GTATTGTTGT GGAGGGAGAA TCGCCTAAAA CAACTCCTAA AACAACCAGG
CCTGGCCGAA AATCCGTTAA GAAGAAAGGC GTTTAA
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| Protein sequence | MAFLKHYTWL LGLTAFAVWQ MPNILTWPLS TQKLLPWLPY VIAGLGVFVG IFLNRLQPIL
ILLSLVCFNI GMQYFIPAGS TGLSAVTLFP VLAILLPLNL LLWLLFPERG IHDKVYTIFQ
LALLVGQVYL VYWVMENLPL TYWQWISQNI SIDGLNLSTA ALIAMVSVWL ILMLRNALLS
QPKVLDRTVV FVLFLMGFGL NAFYQFGSIA WVSSFAATML LLSLIFDAHH IAYTDQLTGL
NGRRALLESF LGLGRKYSIA MMDIDHFKSF NDTYGHDVGD AVLRTVAYEL SLISTGQVYR
YGGEEFTVVF KGKQAQQVKP ALEAVRYAIE NRVLEVEKQG QPVETKVTVS FGLAERNDQF
KKPEEVMKAA DEALYQAKKS GRNRIVVEGE SPKTTPKTTR PGRKSVKKKG V
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