| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1370 |
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| Symbol | |
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| ID | 3760756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1484872 |
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| End bp | 1485930 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786104 |
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| Product | pseudouridine synthase, RluD |
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| Protein accession | YP_391639 |
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| Protein GI | 78485714 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTAGTC AAAGATTAGA AGCCAGAATT CCAACGGATA AAATGGGACA CCGCTTAGAT
GCCGTGTTGG CAGAATTGTT TTCTGATTAT TCTCGCAACC GTATTCAGGA TTGGATTCGT
GCGGGGTTGG TCACGCTTGA CGGGGTGGAA CATAAAAAAC CGAACTTTAA AGTGTTTGGT
GATGAATCAG TGGTTTTATT GGCAGAAATC GAAGATGAAG TGTCTTACCA GGCTCAAGAC
ATTCCGATCG AGGTTGTTTA TGAAGATGAG GACATACTGG TGCTTAATAA GCCTGCGGGC
TTAGTGGTTC ATCCAGGAGC GGGTAATCCA GATGGCACCT TATTGAATGC GTTGCTTTTT
CATTATGAGA CGATTCGTGA AGTCCCTCGT GCAGGGATTG TTCACCGCTT AGATAAAGAA
ACCTCTGGGC TCATGGTGGT GGCGAAAAAT GTTCCGGCTC AGACGCATTT GGTTGAGCAG
CTTCAACAGC ATGATGTGGA ACGTGTTTAT GATGCCATTG TTGTGGGAAA AATGATTTCA
GGTGGAACAA TCAGTAAGCC GATTGGACGT CATCCGACGG ATCGCAAACG AATGGCCGTG
TTAACCGTTG GCGGCAAACC CGCGACTTCG CATTATCGGG TTTTAGAGCG TTTTCGTGAA
CATACGCATG TGAGGGTTAA GTTGGAAACC GGGCGCACGC ACCAAATCCG AGTTCATATG
GCGTATTTAG GCTTTCCTTT GGTAGGGGAT CCTGTTTATG CCGGGCGTTT GCGTATTCCA
CAACAGATGA TGCCGGAATT TGCGGATTAT TTAAGAGGCT TTAAGCGCCA AGCACTCCAT
GCCGGGCAGC TCAGTCTGAC CCACCCACGA ACGGGAAAAA CCATGAAATG GAAAGTCTCT
ATGCCGGATG ACATGTTAGA ACTCATTGAT ATTCTTAGAG ATGATATGGA AGACTTCCAA
GCTATGAAGT ATGGGGATCG TATGAGCTAT GATGAATACG ATTACGATAA TGGCGTCGAA
GTGGAATGGG TAACGGATGC CGATATTCCA CAGGAATGA
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| Protein sequence | MSSQRLEARI PTDKMGHRLD AVLAELFSDY SRNRIQDWIR AGLVTLDGVE HKKPNFKVFG
DESVVLLAEI EDEVSYQAQD IPIEVVYEDE DILVLNKPAG LVVHPGAGNP DGTLLNALLF
HYETIREVPR AGIVHRLDKE TSGLMVVAKN VPAQTHLVEQ LQQHDVERVY DAIVVGKMIS
GGTISKPIGR HPTDRKRMAV LTVGGKPATS HYRVLERFRE HTHVRVKLET GRTHQIRVHM
AYLGFPLVGD PVYAGRLRIP QQMMPEFADY LRGFKRQALH AGQLSLTHPR TGKTMKWKVS
MPDDMLELID ILRDDMEDFQ AMKYGDRMSY DEYDYDNGVE VEWVTDADIP QE
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