Gene Tcr_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1366 
Symbol 
ID3760752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1480638 
End bp1481207 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content43% 
IMG OID637786100 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_391635 
Protein GI78485710 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCC CATTAACACT TAACCCAGAA ACCCATGTTT TTAATGAAGC ACGGTATATT 
GAAAGCCCTA ACTTCGATGA TCGTCCGGAT GAAAACGATT TAGATTTGGT TGTCATTCAT
GGCATTAGTC TACCACCTGG ACAGTTTGGG GGGCGTGGTG TTGAGCAACT TTTTACCAAT
CAACTTGACC CGGAAGAAGA CCCTTACTAT CAACAGATTC AATCGTTGAA AGTGTCATCG
CATTTGTTTA TTAATCGATC CGGTGAGTTA TTTCAGTTTG TGCCTTTGAA TCGTCGTGCC
TGGCATGCGG GCGTATCGAG CTTTAATGGC CGTTCTGCCT GTAATGATTT TTCGATTGGA
ATCGAACTGG AAGGTACGGA TAAAACGCCT TACACCGCCG CGCAATACCA AACCTTAAAA
GAGGTCCTGT CAGCGATTTT TGAACAATAC CCTTCGATTC CAGCCAATCA TATTCAAGGC
CATTGTGATA TTGCACCAGG TCGAAAAACC GATCCTGGCG AGTATTTTAT GTGGCAAGTG
CTTGATGGGT TTTTAAAAGA TCACGCCTAA
 
Protein sequence
MKSPLTLNPE THVFNEARYI ESPNFDDRPD ENDLDLVVIH GISLPPGQFG GRGVEQLFTN 
QLDPEEDPYY QQIQSLKVSS HLFINRSGEL FQFVPLNRRA WHAGVSSFNG RSACNDFSIG
IELEGTDKTP YTAAQYQTLK EVLSAIFEQY PSIPANHIQG HCDIAPGRKT DPGEYFMWQV
LDGFLKDHA