Gene Tcr_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1360 
Symbol 
ID3760520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1475679 
End bp1477100 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content45% 
IMG OID637786094 
Productreplicative DNA helicase 
Protein accessionYP_391629 
Protein GI78485704 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAGG ACATACTTTT TAAAACCCCG CCCCATTCAA TTGAATCGGA ACAGTCCGTC 
ATTGGGGGAT TAATGTTGGA TAATGAAAAG TTTTCCGATA TTTCTGTCAT CTTAAAGGCA
GAAGATTTTT ACACTCAACA ACACCAACTG ATCTATACCG CTATTGTTCA CCTGAGCGAA
CGTAACAAAC CCTTCGACCT TATCACCGTG ATTGAAATGC TGGAGTCCAC CGGGAAATTA
CCCGATGTTG GCGATAAGCA ATATCTCATT GACTTGGTCT CGAATACTCC TGGTTCGGTT
AATATTGAAT TTTATGCGGA AACGGTAAGA GAAAAAGCAA TCTTACGCTC GCTGATTACC
GTATCGAATG AGATTTCAGA AGCCAGTTAT TTCCCGCAAG GCAAAGACAT TCGAGAGGTC
TTAGACCTAG CGGAATCGAA AGTGATGGGG ATTGCTGAAC ATGGATCCGG TAAGCAGCGC
GAATACCAAA CCATGGAAGT TTTGCTGAAT AAAGCAGTCA GCACCATTGA TGAGCGTTTT
AATTCCGACG GGTCAATCAC CGGGCTGGCG ACCAAATTAA ACGATTTTGA TGAAGTGACA
TCCGGTCTTC AAAATGGCGA CTTAATCATT GTCGCAGGGC GACCGTCAAT GGGGAAAACC
ACTTTTTCAA TGAACATGGC TGAAAACATT GCCATGCAAG GTGCCCCCGT TGCGGTTTTC
AGTATGGAAA TGCCAGGTGA GCAACTGGTA CTTCGTATGA TCAGTTCGAT TGGTCGAATT
GATGCCGAGC GGATTCGAAC GGGTAAACTG CAGCAAGAAG ACTGGCCAAA CTTAAACAAA
GCCGTGAGTA TGTTGTCTAA AGCTCAGGTA TTTATTGACG ATACACCAGC CTTGATGATC
ACAGACTTGC GTGCCCGCGC GCGACGTATT GATAAAGATA TTCGTGATGC GCAGTATAAA
AAAGCCATCG AAGCCGGTGT GGAAGATCCT GAGTCGCAAA TCACGGGGCT TGGAATGATC
GTCATCGATT ACCTGCAGTT GATGCGAGGT TCAACCAATA CCGATAACCG CGTGAATGAG
ATTTCTGAAA TCTCTCGTGG TTTGAAAGCC ATTGCCAAAG AATTAAGTGT GCCTGTTGTC
GCATTATCGC AGCTCAGCCG TAACCTTGAA CAACGCCCAG ATAAGCGCCC TAAAATGGCC
GATTTGCGTG AGTCAGGGGC GATTGAGCAG GACGCGGATT TAATCATCTT TATTTATCGT
GATGAGGTTT ACAATCCGGA TACGGAAGAC AAGGGCACCG CTGAAATCAT CCTTGGGAAA
CACCGAAATG GTGCGCTTGC TAATATCCGG CTGACCTTTA TCGGGCAATA TACCAAATTT
GAGAATCATG CTGGGTTCGA TGTCCCAGAT GATCCATATT AA
 
Protein sequence
MSQDILFKTP PHSIESEQSV IGGLMLDNEK FSDISVILKA EDFYTQQHQL IYTAIVHLSE 
RNKPFDLITV IEMLESTGKL PDVGDKQYLI DLVSNTPGSV NIEFYAETVR EKAILRSLIT
VSNEISEASY FPQGKDIREV LDLAESKVMG IAEHGSGKQR EYQTMEVLLN KAVSTIDERF
NSDGSITGLA TKLNDFDEVT SGLQNGDLII VAGRPSMGKT TFSMNMAENI AMQGAPVAVF
SMEMPGEQLV LRMISSIGRI DAERIRTGKL QQEDWPNLNK AVSMLSKAQV FIDDTPALMI
TDLRARARRI DKDIRDAQYK KAIEAGVEDP ESQITGLGMI VIDYLQLMRG STNTDNRVNE
ISEISRGLKA IAKELSVPVV ALSQLSRNLE QRPDKRPKMA DLRESGAIEQ DADLIIFIYR
DEVYNPDTED KGTAEIILGK HRNGALANIR LTFIGQYTKF ENHAGFDVPD DPY