Gene Tcr_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1358 
Symbol 
ID3760518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1473921 
End bp1474529 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content43% 
IMG OID637786092 
Productnucleoside diphosphate pyrophosphatase 
Protein accessionYP_391627 
Protein GI78485702 
COG category 
COG ID 
TIGRFAM ID[TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGACG ACGCAAAAAA AATCGAACTG CTTAATACAC ACCGAGCTTA CGATGGTTTT 
TTTAAAATTG ATCAATTGAC CTTTCGCCAC ACCTTGTTTG AAGGCGGGTG GTCTCCAGAG 
ATTAAAAGAG AACTCTTTGG TCGCGGCGAA GCGGTGATTG TTTTATTGTA TGACCTGAAA 
GCAGAAATGG TTGTTTTGAT CGAACAATGC CGTGCAGGAG CGTTACAACA TGCCGCATTG 
AAAAATCACC AGGCCTGGCT AATTGAGCCC GTTGCCGGAA TGGTTGAAAC GGGGGAATCT 
AATTTAGTCG CCTGTAAAAG AGAAGCGTTT GAGGAAGCTG GAGTCACTCA CGCTGAATTT 
GAATACATCT GTCAGTTTTA TCCTAGCCCG GGAGGCAGTG ATGAAATTTT ATATTTATAC 
GCGGCTGAAG TCGATTCGGA AGCGTTGCCG GATTACGCTG GTGAAGCCAG CGAAGTTGAA 
GATATTCGTT TGATTAAAAT GCCTTTTTCA CAAGCGAAAT CTAAATTGAT GAAAGCGGAA 
TTTAATGTCG CCAGTACGAT TATTGCATTG CAATGGTTGC TGTTCCAGAA AATAGAAAAG 
AGTTGTTAA
 
Protein sequence
MTDDAKKIEL LNTHRAYDGF FKIDQLTFRH TLFEGGWSPE IKRELFGRGE AVIVLLYDLK 
AEMVVLIEQC RAGALQHAAL KNHQAWLIEP VAGMVETGES NLVACKREAF EEAGVTHAEF 
EYICQFYPSP GGSDEILYLY AAEVDSEALP DYAGEASEVE DIRLIKMPFS QAKSKLMKAE 
FNVASTIIAL QWLLFQKIEK SC