| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1349 |
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| Symbol | |
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| ID | 3760507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1463435 |
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| End bp | 1466320 |
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| Gene Length | 2886 bp |
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| Protein Length | 961 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637786081 |
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| Product | aminomethyltransferase |
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| Protein accession | YP_391618 |
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| Protein GI | 78485693 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0486795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTA GATTGGAAAA ACAGCCTCTG GAATGGATAG ATCGTTCAAA GCAAATTACC
TTTGAGGTTG AAGGAAAATT CATACCTGCT TTTAAGGGAG ATGTCATCTC AAGTGCCCTA
TGGTCAGAAG GCCATAAGGT TTTGGGAAGA AGTTTTAAAT ATCACCGCCG TCGTGGCCTG
CTGACAATGG CAAATCATGA TGTCAATGCT TTGTTCCAGT CCAAAGATCG TCCGAATGTT
AGGGGGGATG TCGTATCCGC AAAAGAAGGG ATAAAACTGA CTTCCGTCAA CACCTTTGGC
AATCTAGAGC GCGATGCTGG GTCCTTTGTA GAGTTGATTT CAAGGTTTTT ACCGGTTGGG
TTTTATTATC GTGCTTTTTA TTCACCTAAA TTTTTATTCC CCAAGTGGGA GTCTTTGATT
CGCCACATGG CGGGGTTGGG TAAGGTTGAT ACGAATTGGA CACAAGAGCG AAAGCATAAG
CGATATCACT ATTGTGATGT GGCTGTAATT GGTGCAGGAC CAGCCGGGAT GAGTGCCGCC
ATAAAAGCTG CTGAAGGTGG TGTCGATGTG TGTTTGATCG ACGAAAATCC TTTTATTGGA
GGGTCTCTGG ATTATCAATA TGTTAACGAT CCTCTTCTAG AATCGACACG TGAGAACGTT
AAGAAAAAAA TTGCTGAAAT GCCTAATATC ACAGTGATAT CTTCGGCTTA TGTTGCTGGC
TACTATGGCG ATAATTGGTT AGCAGTGAAT ACCGAAAATG GATTAATTAA ATTGTCAGCC
CAATCGGTAG TGGTCGCAAC AGGGGTGTTT GAACAACCTG CTGTGTTTAG AAACAATGAT
TTGCCAGGTG TTATGAACGC CAGTGCCGCC CAACGTTTGA TGGCTCGATA TGGCGTTGCG
CCATGCCGTG AAGCAGTGAT TTTGACTTCC AACCCGGAAG GGTATCAAGC GGCTTTGGAT
TTATGTAAAG CAGGGGTTCA AGTTCTGGCG GTTTTAGACA CCGGACGCCC CAGTAATCCA
TGGTATGAAC AGGTCTATGA TTTGGGTATT CCGGTTTATA AAGAGATTCA AGGGATTGAA
GCGCACGGTA AAAAAGAGCT CAGTGCTGTC ACCTTTCAAA TTAATGGTTT GTCGCATACG
TTGAACTGTG ACGGTTTATT GATGAGTGTG GGATGGGCTC CGGTAGGGGC GCCGATTTAT
CAGGCAGGAG GATTGTTTTC ATACGATGAA AACTTGCATC AGCTTTTACC CAAAAAATTG
CCAGAAGGAC TGTTTGCCTG TGGTCGGATA AACGGAATTT TTGATATTCA CAATCAGTTG
CAAGATGGAG AACAGGCCGG TTTGAATGCA GCTGAATATG CCAAAGGCTT GAATTTAACG
CCGTTCAATT ATTTGAAATC GACAACGGCA CACTCGCATC CTTATCCTGT TTGGGATCAC
CCAAAAGGCA AGGCATTTGT CGATTTTGAT GAAGACGTTC AGTTGAAAGA TTTGAAAGCT
GCCATAGCGC AAGGGTTTGA CAATATTGAA CTTATGAAGC GTTTTTCGAC AATCGGTATG
GGACCCAGTC AAGGCAAACA CAGCAATATG AATGGGATCC GCATTCTAGC CAAGTTGACT
GGAAAAACTA TCGATCAAAC TGGATCGACC ACGGCGCGTC CGATGTTCCA TCCTACCCCC
GTGTCCCATT TGGCTGGTAT GCGTTTTAGA CCTGAGCGCC AAACGGCACT TCATGCTTTA
CACGTCAGTG CTAAGGCTAA ATTCATGGAA GCGGGCAATT GGCTGAGACC GGAGTATTAT
CAAACAGAGT CGGATCGGAA GACCTGTATA TATGCTGAAG CCTTGGCGGT TAGACAGTCA
GTGGGGCTGA TCGATGTCTC TACCCTTGGT AAGTTAGAAA TTTTTGGAGA AGACGCCGCT
GCATTGATGG ACCGACTTTA CACGATGACG ATGTCGAATA TGAAAGTCGG AGCTAGTCGC
TATGCATTGA TGGTAGACGA TACAGGGGTC ATTATCGACG ATGGTGTTTC GGTGCGTTAC
TCCGAAGATC ATTTTTACGT GACCACCACC ACGACCAGCT CAGATTCAGC TTATCGAATG
ATTCAGAAAA AAATTATCGA ATGGGGATTA GATGCCACTG TCTTAAACCG AACTGGCCAA
CTTGCCGCTA TGAACCTAGC AGGCCCCAAT AGTAGGAAGG TTCTAGCAAA ATTGACGGAT
TTAGATTTGA GTAATGACGC TTTCCCATAT CTGGCCATGC GTCAAACTCA GGTATTGGGA
TTTGACGCCA CTCTGATTCG TGTGGGTTTT GTAGGAGAGT TAGGTTATGA AATTCATTTA
CATGACAAGG ACGCCACGCC CGTCTGGCAG GCACTTATGG TCGAAGGTGC AGAGTTTGGT
ATTCGACCAT TTGGTGTCGA AGCTCAGCGA TTATTGCGGT TGGAGAAAGG GCACATTATT
GTCGGGCAGG ATACAGATGG TTTGATGAAC CCGTTTGAAG CCGGCATGCC TTGGGCGGTG
CATTTGAAAA AGCCATCTTT CATTGGTAAA CCAAGTTTGG CCAAGTTGAA AACTATGCAA
AAACGCAAAC TGATAGGTTT TGAATTGCTT GTAGAGCTTT ATGACGAACC TGTGTTGGAA
TCGAATCTAA TTATTGAGTC TGGAGATATT GCTGGGCGGG TTACCAGTGT GGCCTTTAGT
CCATCTTTGA ATAAAACCAT TGGCTTGGCA GATGTGTCAA TGGAGTATTC TCAACTGGAT
GAGGTAATTC ATATCAAGTT AACCAGTGGT GCTCTAATCA ATGCCAAAGT GGTTCCTTTA
CCTTTTTATG ATCCGGAGGG GGAAAGACAG AGACCTGAGG AACAGACGGA AGGAGAGACG
TCATGA
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| Protein sequence | MKLRLEKQPL EWIDRSKQIT FEVEGKFIPA FKGDVISSAL WSEGHKVLGR SFKYHRRRGL
LTMANHDVNA LFQSKDRPNV RGDVVSAKEG IKLTSVNTFG NLERDAGSFV ELISRFLPVG
FYYRAFYSPK FLFPKWESLI RHMAGLGKVD TNWTQERKHK RYHYCDVAVI GAGPAGMSAA
IKAAEGGVDV CLIDENPFIG GSLDYQYVND PLLESTRENV KKKIAEMPNI TVISSAYVAG
YYGDNWLAVN TENGLIKLSA QSVVVATGVF EQPAVFRNND LPGVMNASAA QRLMARYGVA
PCREAVILTS NPEGYQAALD LCKAGVQVLA VLDTGRPSNP WYEQVYDLGI PVYKEIQGIE
AHGKKELSAV TFQINGLSHT LNCDGLLMSV GWAPVGAPIY QAGGLFSYDE NLHQLLPKKL
PEGLFACGRI NGIFDIHNQL QDGEQAGLNA AEYAKGLNLT PFNYLKSTTA HSHPYPVWDH
PKGKAFVDFD EDVQLKDLKA AIAQGFDNIE LMKRFSTIGM GPSQGKHSNM NGIRILAKLT
GKTIDQTGST TARPMFHPTP VSHLAGMRFR PERQTALHAL HVSAKAKFME AGNWLRPEYY
QTESDRKTCI YAEALAVRQS VGLIDVSTLG KLEIFGEDAA ALMDRLYTMT MSNMKVGASR
YALMVDDTGV IIDDGVSVRY SEDHFYVTTT TTSSDSAYRM IQKKIIEWGL DATVLNRTGQ
LAAMNLAGPN SRKVLAKLTD LDLSNDAFPY LAMRQTQVLG FDATLIRVGF VGELGYEIHL
HDKDATPVWQ ALMVEGAEFG IRPFGVEAQR LLRLEKGHII VGQDTDGLMN PFEAGMPWAV
HLKKPSFIGK PSLAKLKTMQ KRKLIGFELL VELYDEPVLE SNLIIESGDI AGRVTSVAFS
PSLNKTIGLA DVSMEYSQLD EVIHIKLTSG ALINAKVVPL PFYDPEGERQ RPEEQTEGET
S
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