| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1340 |
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| Symbol | |
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| ID | 3760702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1455007 |
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| End bp | 1456260 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786072 |
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| Product | ammonium transporter |
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| Protein accession | YP_391609 |
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| Protein GI | 78485684 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR03644] probable ammonium transporter, marine subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGGGA ATTTTTTACA ACTATCCTAT GCTTTGGATA CGTTTTATTT TTTAATGAGT
GCTGTACTGG TCATGTGGAT GGCTGCTGGT TTCGCAATGT TGGAAGCGGG ACTTGTTCGC
AGTAAGAATA CAGTCGAAAT ACTAACTAAA AACGCATTGC TCTACAGTGT TGCTTGTTCG
ATGTATCTGA TTGTCGGTTA TAACGTGATG TATCCGGGCG ACCCTATCAG TGCTTACCTA
CCGAACTTAA GTTTCTTTTT AGGTGCCGAC AATACAGTTG AAGCGGTCAT TGCAGGTGGT
GATGGTGCAC CTTATTACTC TGGAATGTCT GATTTCATTT TCCAAGCGGT TTTTGCAGCA
GCCACAATGT CAATTGTATC TGGTGCCATT GCTGAACGTA TGAAGCTTTG GCCTTTCTTG
GTTTTCGCGG TTGTCATGAC ATCATTCATT TACCCTATGG AAGGTTACTG GAAATGGGGC
GGCGGTTGGT TAGACCAGCT TGGATTCCAA GACTTCGCTG GTTCCGTTGT TGTTCACATG
GCTGGTGCCG CAGCAGCATT AGCAGCGGTT ATCATGGTCG GTGCTCGTAA AGGTAAATAC
GGTCCTAATG GTGAAGTTCA TCCGATTCCT GGTGCTAACC TTCCAATGGC AACATTGGGT
ATGTTTATCC TATGGATGGG CTGGTTCGGG TTCAACGGCG GTTCGGAGCT AATGGTTTCA
AACGTTGAAG AAGCCAATGC CGTAGCCACT ATTTTCGTTA ACACCAATGC GGCGGCGGCG
GCAGGTATGA TTGCTGCAGC GTTGTTAAGT AAGTACATGT TTGGTAAAAC TGATTTGACT
ATGGTTCTTA ACGGTGCTCT AGCCGGTTTG GTTTCCATTA CGGCAGAACC ACTTGCGCCT
ACGCCAGGTT TGGCAATGTT CATCGGTGCT GTTGGTGGTC TGATTGTGGT ACTTTCGGTT
GTGTTCATGG ATAAATTGAA ACTGGACGAT CCTGTTGGTG CTATCTCTGT ACACGGTACA
GCGGGTATCT GGGGTATCTT CGCAGTACTG TTCAGTAACG CTGATGCAAC GTTCTTTGGA
CAGTTCGTAG GTACAGTCGC TACATTTGCA TGGATGTTCA TCACATCAAT CATTGTTCTA
TACATCATTG ATAAGACAAT GGGACTTCGC CCTACTGAGG AAGAAGAGAT GGAAGGAATG
GATATGAAAG AGTGTGGCAT GGAAGCCTAC CCTGAGTTTG ACCATAAGTC ATAA
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| Protein sequence | MEGNFLQLSY ALDTFYFLMS AVLVMWMAAG FAMLEAGLVR SKNTVEILTK NALLYSVACS
MYLIVGYNVM YPGDPISAYL PNLSFFLGAD NTVEAVIAGG DGAPYYSGMS DFIFQAVFAA
ATMSIVSGAI AERMKLWPFL VFAVVMTSFI YPMEGYWKWG GGWLDQLGFQ DFAGSVVVHM
AGAAAALAAV IMVGARKGKY GPNGEVHPIP GANLPMATLG MFILWMGWFG FNGGSELMVS
NVEEANAVAT IFVNTNAAAA AGMIAAALLS KYMFGKTDLT MVLNGALAGL VSITAEPLAP
TPGLAMFIGA VGGLIVVLSV VFMDKLKLDD PVGAISVHGT AGIWGIFAVL FSNADATFFG
QFVGTVATFA WMFITSIIVL YIIDKTMGLR PTEEEEMEGM DMKECGMEAY PEFDHKS
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