Gene Tcr_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1332 
Symbol 
ID3760694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1447474 
End bp1447809 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content39% 
IMG OID637786064 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_391601 
Protein GI78485676 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0235382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTT TTATTTCTGA TGCAATGGCC GAAGGTGGCG CAGCAGCACA AGGAAGTGGT 
TTTGAGGCAT TATTGCCGTT AATTTTATTG TTTGTGGTGT TTTACTTTTT ACTGATTCGT
CCTCAGCAAA AGAAAGTTAA AGAACATAAA AAACTTGTAC AAGCACTTGG CAAAGGCGCT
GAAGTGGTGA CATACGGTGG TTTAGCAGGA AAAATTCGTG AATTGGATGA AAACTTCGTT
GATCTGGAAG TTGCAGACAA TGTTGTTGTA AAAATCGAAC GTCAAAACGT CGCTCGCGAA
TTACCAAAAG GGACATTAAA AGGAACAGCT GAATAA
 
Protein sequence
MSFFISDAMA EGGAAAQGSG FEALLPLILL FVVFYFLLIR PQQKKVKEHK KLVQALGKGA 
EVVTYGGLAG KIRELDENFV DLEVADNVVV KIERQNVARE LPKGTLKGTA E