| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1330 |
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| Symbol | |
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| ID | 3760692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1444432 |
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| End bp | 1445448 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637786062 |
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| Product | SecF protein |
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| Protein accession | YP_391599 |
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| Protein GI | 78485674 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0105179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACAA GCATGGAAAA TCAAAAAGAA TATAACTTTA TGGGGCATCG TAAGTTAGCG
ATGTCCGTTT CATTGTTTTT TATCGTAGCA TCCATCATCG GTCTGTTTGT CAAAGGACTG
AACTTTGGTA TCGACTTTAC CGGTGGAACC ATTGTCGAGC TGTCTTATGA CAAGCCGGCA
GAGGTCGACA CCATTCGTAC CTCGTTGCAA GACTCCGGTT TTGAACGAGC GGTGGTGCAG
AACTTTGGCT CAGCAGAAGA TGTGTTGATT CGAATTGCGC CGAAAGAAGG TGTGAATTCT
GCTCAGATCA GTAACCAGGT GATGGAAGCC TTGCGTGAAA ATCATTCGGA AGACTTTGAG
TTGCGTCGCG TTGAATTCGT TGGTCCGCAA GTTGGGGATG AACTGACTGA AGACGGCGCT
TTAGCGGTTA TTTATGCCCT GATTGGGGTT CTGATTTATG TCGCGTTGCG TTTTGAGTTC
CGTTTTTCAA TTGGGTCTGT TGCCGCCTTG GTACATGATG TTGTGATTAC CTTGGGCGTG
TTTTCCTGGA CACAGGCTCA GTTCGACTTA ACGGTGTTAG CAGCGATACT CGCGGTCATC
GGTTACTCCC TGAACGACAC CATTGTTGTG TTTGACCGGG TACGGGAAAA CTTCAGAACG
GTGCGAGACG GTTCGCCGGA AACAGTCACC AATTTGGCGG TCAACCAAAT GTTGGCGCGT
ACCTTAATGA CGTCCTTAAC CACCTTGCTG GTGTTGGTGG CGTTGTTTGT ACTGGGTGGT
GAGATTATCC ATAACTTTGC GTTGGCATTG ATTGTCGGGG TTGTGGTGGG AACCTATTCC
TCAACCTTTG TGGCCAGTTC GATTGCGTTG GCATTAGGGG TTTCAAAAGA AGACTTGATG
CAGCCGGTTA AAGAAGGCGC CGATGCCACC GCTCAAGAAG AAGAGTTAAA CCGAATCTTC
TTAGAGCAAG AAGCGGCACG TGAAGCAAAA GAAGCGGCCA AGAATAATAA ACACTGA
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| Protein sequence | MSTSMENQKE YNFMGHRKLA MSVSLFFIVA SIIGLFVKGL NFGIDFTGGT IVELSYDKPA
EVDTIRTSLQ DSGFERAVVQ NFGSAEDVLI RIAPKEGVNS AQISNQVMEA LRENHSEDFE
LRRVEFVGPQ VGDELTEDGA LAVIYALIGV LIYVALRFEF RFSIGSVAAL VHDVVITLGV
FSWTQAQFDL TVLAAILAVI GYSLNDTIVV FDRVRENFRT VRDGSPETVT NLAVNQMLAR
TLMTSLTTLL VLVALFVLGG EIIHNFALAL IVGVVVGTYS STFVASSIAL ALGVSKEDLM
QPVKEGADAT AQEEELNRIF LEQEAAREAK EAAKNNKH
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