Gene Tcr_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1316 
Symbol 
ID3762186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp1433028 
End bp1433576 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content45% 
IMG OID637786048 
ProductFMN-binding 
Protein accessionYP_391585 
Protein GI78485660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.000000101636 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATA AGATAAAACT CAGCGTTTAT CTATTATTCA CTACCCTCTC TCTACTCTCA 
GTAGAGAGCC AGGCTTCCTC TGTGCCAGAG GAAGTCTCCG AATTCATTCA AACCAACTTA 
TCTGACACCG CTCAGAGAAA GTTCCTGTGG CTAACAGGAG ATAAAAAACA AATCTCCAGC 
GAAATCTTAA GCCACCCCTA TTACAAAATT CGAGCACCTT ATTGGCAAGC CGCCGACGAA 
AATCGTTCTC GCTCCGCCAA AACGTTATGG GTACTGGAAG AAATCGGTAA AGAAAAACTC 
ATTACCATCG GCGTTGTAAT CGAACAACAA AAGATTCAAG CCGTACGCAT TCTTAAATTC 
CGCGAGAGCC GCGGTTGGGA GGTTGAACTG CCTAGCTTTA CAAAACAGTT CGAAGGCAGT 
CAGCTAGATG ATTCGAAACA GCTCAATCAA TCTGTAGACG GCATCAGTGG CGCCACCCTT 
TCCGTACGAG CGGTGACTAA TATTGCCCGC TTGGCACTCT ACTTACAAAA AACACTCCCA 
AACCCCTAA
 
Protein sequence
MMNKIKLSVY LLFTTLSLLS VESQASSVPE EVSEFIQTNL SDTAQRKFLW LTGDKKQISS 
EILSHPYYKI RAPYWQAADE NRSRSAKTLW VLEEIGKEKL ITIGVVIEQQ KIQAVRILKF 
RESRGWEVEL PSFTKQFEGS QLDDSKQLNQ SVDGISGATL SVRAVTNIAR LALYLQKTLP 
NP