| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1312 |
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| Symbol | |
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| ID | 3762182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1428170 |
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| End bp | 1429654 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637786044 |
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| Product | peptidase U32 |
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| Protein accession | YP_391581 |
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| Protein GI | 78485656 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0172962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGCAG AAAACTTTAC ACCAGAACTA CTCTCGCCAG CCGGCACCTA TAAAAACATG
GAATATGCGT TTGCGTATGG CGCGGATGCG GTTTATGCCG GACAGCCTCG TTACAGCTTG
CGTGTGCGTA ATAATGAATT TGATGAAGAA ACCTTGGCAA AAGGGATTAA GCGCGCGCAT
GAGCTGGGCA AAAAATTCTA TGTGGTGAGT AATATCGCCG CGCACAATGC CAAAATCAAA
ACCTATATGC GTGACATTGC GCCGATTATC GCAATGAAAC CAGACGCATT GATCATGTCG
GATCCGGGCT TGATTGCGAT GGTGAGAGCT GAGTATCCCG AGCAGGAAAT TCATTTGTCT
GTGCAGTCCA ATGCTGTGAA CTGGGCGACT GTCAAATTCT GGCATGACCA AGGGATTGCC
CGTGTCGTGC TGTCACGCGA GTTGTCGATT CAAGAAATTC GTGAGATTGG TGAAGCGGTT
CCGGGAATGG AGCTTGAAGT GTTTGTGCAC GGGGCGCTTT GCATCGCTTA TTCCGGTCGT
TGTTTGTTGT CTGGTTACAT TAATAAGCGT GATGCGAACC AGGGCACTTG TACCAACGCG
TGTCGTTGGA ATTACAACAC GTATGAAGGT AAGGAAGACG AGAGCGGTGA CATCGTCGGG
ATTCCTGTCG ACAAAGTGGC GAATATCACC GATTTGACGT CTGATACTTC TGAGTTTTCT
GGGCCTGAGC CGACGTTAGG TGAGGGGAAA CCCACAGATG AAGTGATGTT GCTGGAAGAA
GAAGGGCGCC CGGGTGAATA TATGCCGGCG TTTGAAGACG AGCACGGCAC TTATATTATG
AATTCGAAAG ACCTGCGTGC GGTGGAATTG ATTCCCGAAC TGGTTGAAAT GGGTGTGGAT
TCCTTAAAAA TTGAAGGGCG TACCAAATCG CATTATTATG TGGCGCGTAC GGCACAAGCC
TATCGTAAAG CGATTGATGA TGCCGCCGCA GGCCGACCTT TTGATACGAG CTTATTGGGT
GAGCTGGAAA GCTTGGCCAG CCGTGGTTAC ACGGAAGGTT TCTTGCGTCG TCACGTTCAC
TCTGAATATC AAAACTATGA ATACGGCGTG TCTAAATCAG ATCGCCAGCG TTTTGTGGGT
GAAGTGCTTG ATGTGGTTGA GCGCGACGGT CAGAGTCTGT TGGAAATTGA TGTGAAAAAT
AAATTTTGCC TAGGCGATTC GATTGAAATT ATGACACCGG CCGGTAATGT CACGTTAAAA
CTGTCTGAGA TGCAGGACCA TCACGACAAG CCGGTTGAGT GCGCTTTAGG ATCAGGTTGG
CGTGTCCGTA TTCCGAACCC ATTCAAAGAC TTGGATGTTG AGACCTTGAA GTTTGGTCTG
GTGATGCGTA ATGAAGCCTG GGGTGGCGAT TTGAAACGTG ACGCTGCGGC GCGCGATAAA
AAGAAAGCCA GTGAGCAGGC CGCTAAAGAA ACAGCAAAGG TTTGA
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| Protein sequence | MKAENFTPEL LSPAGTYKNM EYAFAYGADA VYAGQPRYSL RVRNNEFDEE TLAKGIKRAH
ELGKKFYVVS NIAAHNAKIK TYMRDIAPII AMKPDALIMS DPGLIAMVRA EYPEQEIHLS
VQSNAVNWAT VKFWHDQGIA RVVLSRELSI QEIREIGEAV PGMELEVFVH GALCIAYSGR
CLLSGYINKR DANQGTCTNA CRWNYNTYEG KEDESGDIVG IPVDKVANIT DLTSDTSEFS
GPEPTLGEGK PTDEVMLLEE EGRPGEYMPA FEDEHGTYIM NSKDLRAVEL IPELVEMGVD
SLKIEGRTKS HYYVARTAQA YRKAIDDAAA GRPFDTSLLG ELESLASRGY TEGFLRRHVH
SEYQNYEYGV SKSDRQRFVG EVLDVVERDG QSLLEIDVKN KFCLGDSIEI MTPAGNVTLK
LSEMQDHHDK PVECALGSGW RVRIPNPFKD LDVETLKFGL VMRNEAWGGD LKRDAAARDK
KKASEQAAKE TAKV
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