Gene Tcr_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1310 
Symbol 
ID3762180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1427217 
End bp1427768 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content44% 
IMG OID637786042 
Producthypothetical protein 
Protein accessionYP_391579 
Protein GI78485654 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0111987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCGAC AGTCTTTTCA GTTTATTCTG CTTGCCTTGT TGTTGACCTT TATCAGTGTT 
TCAGTGCAGG CGGACGTTTC TAATATTCAC CCAAACGTTC AAAAAATTCT AGATCAGACC 
GACGTCCCGG AAGGGGTGGT GTTTGATATC GAAACTCTGG ACAGTGATGC CTTAAACTCA 
CTGGCACCTT ATGTCATTCA ACAAATCGAA TTGATTCGCA AACGCTATCC TGACGTTGAT 
ATTGCGGTCG TTACGCATGG TGCGGAAGAA TTTGCTTTGC AAAAACAAGC TCAATCACAA 
AATGCGGATT TGCATGCTAT GTTTAATCGG CTGGTGACGG ATCAATCTGT TTCCGTCCAT 
GTGTGCGGTG CCGTGGGTGG GTTGAAAAAC CTGACCCGAG AAGATTTTCC GGAGTTTGTC 
AGTTATTCCG ATTCAGGGAT GGCGCAATTG AATGACTATA AAGCGCTTGG CTATCAGGTT 
GTTGTGATTA AACAGCTGTC GGAGAAAGAG CGGAAGGCAC TCTTTGAAAC GCCAAAAAAA 
TTCATTCAAT AG
 
Protein sequence
MIRQSFQFIL LALLLTFISV SVQADVSNIH PNVQKILDQT DVPEGVVFDI ETLDSDALNS 
LAPYVIQQIE LIRKRYPDVD IAVVTHGAEE FALQKQAQSQ NADLHAMFNR LVTDQSVSVH 
VCGAVGGLKN LTREDFPEFV SYSDSGMAQL NDYKALGYQV VVIKQLSEKE RKALFETPKK 
FIQ