Gene Tcr_1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1301 
Symbol 
ID3760683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1418802 
End bp1419419 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content39% 
IMG OID637786033 
ProductTetR family transcriptional regulator 
Protein accessionYP_391570 
Protein GI78485645 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.365782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCTT TGGTTGGATT ATCAGGAATT AAGGATATTT GTTTGAAAAA TACATATGAA 
AATATTATTA ACGCCGCCGT ATGTGTTTGG AACGAAGATT ACAGTGCCCC TTTAAAATCC 
ATTGCAAAAG AAGCCGGCAT CAGCCGGATG ACCCTACATC GTCATTTTTG TGGCCGTGAT 
GCTATTTTAT TAGCCATTGT TGAAGACTTT ATTGAAAAAA TCGTGCTGGT GCTGAATCAA 
GCTGAAAAAG ATCAAGATGA GCCCGTTCAG CAAATGGAGT GTTTGGTAAA GAATACCCAT 
CGTTTGATTG AAGACTATAA CTTTTTGTTT GATTTATTTG AGCAAAAAGG GCGTCCGGAA 
GATTTAGTGG AACGTTTCAA ACGATTTGAA GATTTATTTG AAGCTTTTTT TGTCACAATC 
CAAGCAAAAG GGGTTATAAA ACCCACGATT GACTTTAGAT GGGCCAATGC ATTATTTGAA 
GGTGTGATGA AATCTGGCTT TAGAATGAAA CAAAAAGGGT TTGATCAAGA CGTAGATTTG 
GCCGCAATGA TTTGGGATGC GTATCAATCG GCTATTTTCA CACCGGAAGC CATTGACGAA 
TACAATGCAC GCGTTTAG
 
Protein sequence
MASLVGLSGI KDICLKNTYE NIINAAVCVW NEDYSAPLKS IAKEAGISRM TLHRHFCGRD 
AILLAIVEDF IEKIVLVLNQ AEKDQDEPVQ QMECLVKNTH RLIEDYNFLF DLFEQKGRPE 
DLVERFKRFE DLFEAFFVTI QAKGVIKPTI DFRWANALFE GVMKSGFRMK QKGFDQDVDL 
AAMIWDAYQS AIFTPEAIDE YNARV