Gene Tcr_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1294 
Symbol 
ID3760676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1409937 
End bp1410968 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content42% 
IMG OID637786026 
ProductUDP-N-acetylenolpyruvoylglucosamine reductase 
Protein accessionYP_391563 
Protein GI78485638 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0812] UDP-N-acetylmuramate dehydrogenase 
TIGRFAM ID[TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATTC ACGCTAATTA TTCCCTGAAA AACAGAAACA CGTTTAAAAT CGATATCAAA 
ACGCAGTATT TTATCGAAAT CACCAAGCAG TCTGATATCC CTGTTTTACG ATCAGATATC
AAGCTCGCTG CGCTTCCGTG GATCATACTG GGTGGCGGCA GCAATATTCT GTTCACGCAA
GATCTTGAAA AAGTCATCGT GACCTGCAAG TTCGATAAAA TCAAAGTCAT GAAAGAAGAT
CAAGATAATA TTTGGATTTC TGTGGGCGCA GGCATGCCCT GGCATGAGTT TGTCGAATAT
ACGGTTAAAA ATGGCTATTG GGGCCTTGAA AACCTCGCCC TTATTCCCGG GACGGTTGGT
GCAGCACCGG TTCAAAACAT TGGTGCTTAC GGTTCTGAAG CGAGGGATAC CATCACACGT
GTACAAACGC TCAACTTATT TACCGGCGAA CGAAGAGAAT TTAGAAACAC CGAATGTCAT
TTCGGTTATC GTACCAGTGT CTTTAAGCAG GAGCATGAAA ACCGTTTATT GGTTCATCGA
GTCACGTTTC GTTTGAGAAA AACGCATGCC GGTCATCCTA ATTTGGTCTA CGATCCCTTA
AAAGAAGCCA TACAACACCA ATTTCCAACC ATGGAAAATT TAACCCCTGA AGACGTCTTT
AACACCGTCA TCAAAATCCG ACAGGAAAAA ATTCCAGACC CTCGTATTTA CGGTAATGCC
GGCAGTTTCT TTAAAAACCC GCACGTGACG GAAAAGTACT TTAAAGAACT TTGCGATATT
CATGGTGAAG TACCACATCA CCAAACCATC AACAATGAAT ATAAAATCCC TGCGGCTTGG
TTGATTGAAA AAACAGGCTG GAAAGGCCGT AAAATGAAAA ACGCGGCTGT CTCTGAAAAG
CATGCGTTGG TTTTAATCAA TCTGGGCGAT GCAAAAGGCT GTGAAGTCGT GCATTTGGCT
GAGGCGATTC AAGAAGATGT TGATCACAAA TTTGGCATTC ATTTAGAACG AGAGGTCATC
ATTATGAAAT AA
 
Protein sequence
MHIHANYSLK NRNTFKIDIK TQYFIEITKQ SDIPVLRSDI KLAALPWIIL GGGSNILFTQ 
DLEKVIVTCK FDKIKVMKED QDNIWISVGA GMPWHEFVEY TVKNGYWGLE NLALIPGTVG
AAPVQNIGAY GSEARDTITR VQTLNLFTGE RREFRNTECH FGYRTSVFKQ EHENRLLVHR
VTFRLRKTHA GHPNLVYDPL KEAIQHQFPT MENLTPEDVF NTVIKIRQEK IPDPRIYGNA
GSFFKNPHVT EKYFKELCDI HGEVPHHQTI NNEYKIPAAW LIEKTGWKGR KMKNAAVSEK
HALVLINLGD AKGCEVVHLA EAIQEDVDHK FGIHLEREVI IMK