| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1289 |
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| Symbol | dapD |
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| ID | 3760671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1405305 |
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| End bp | 1406132 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637786021 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_391558 |
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| Protein GI | 78485633 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGCAG ATTTACAAAA AGTCATTGAA GAAGCCTTTG AACGTCGTGC CGAAATCACG
CCAAAAACCG TTGATACTGA AACAAAAGAA GCCATCAACG AAGCCATCAT GCTTTTGGAT
TCAGGGAAAA TGCGTGTTGC AGAACAAAAA GGCGTGGGTG ACTGGCAAGT AAACGAGTGG
TTAAAGAAAG CGGTTTTACT GTCTTTCCGC ACAGAAGAAA ACACCGTTAT GAACTCTTCT
GAAACGCGCT ATTTTGACAA AGTGCCGTCA AAATTTGCTG ACTGGTCTCA AGCCGACTTT
GAACAAGCGG GTATCCGTGT TGTACCACCT GCGATGGCTC GCCGTGGTTC CTTCATCGCA
CCAAGCTCTG TTTTAATGCC TTCTTACGTC AACATCGGTG CTTATGTGGA TTCAGGCTCA
ATGGTCGACA CGTGGGCGAC CGTCGGTTCT TGTGCTCAAA TTGGTAAAAA TGTTCACCTT
TCAGGCGGTG TTGGTATCGG TGGTGTTCTT GAGCCGCTAC AAGCCGCTCC AACAATCATT
GAAGACAACT GCTTCATTGG GGCTCGTTCA GAAGTTGTTG AAGGCGTCAT CGTTGAAGAA
GGATCGGTTA TCTCAATGGG TGTTTACATT GGCCAATCAA CCCGTATTTA TGATCGCGAA
ACAGGTGAAA TCCATTATGG ACGTGTTCCG GCAGGTTCGG TTGTTGTGTC TGGTAACCTT
CCTTCAAAAG ATGGCAGTTA CAGCCTATAC TGCGCCGTAA TTGTTAAAAA AGTGGATGCC
AAAACACTAG GGAAAGTGGG TATCAATGAG TTACTGAGAG ATATTTAA
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| Protein sequence | MSADLQKVIE EAFERRAEIT PKTVDTETKE AINEAIMLLD SGKMRVAEQK GVGDWQVNEW
LKKAVLLSFR TEENTVMNSS ETRYFDKVPS KFADWSQADF EQAGIRVVPP AMARRGSFIA
PSSVLMPSYV NIGAYVDSGS MVDTWATVGS CAQIGKNVHL SGGVGIGGVL EPLQAAPTII
EDNCFIGARS EVVEGVIVEE GSVISMGVYI GQSTRIYDRE TGEIHYGRVP AGSVVVSGNL
PSKDGSYSLY CAVIVKKVDA KTLGKVGINE LLRDI
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