Gene Tcr_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1276 
Symbol 
ID3761665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1390884 
End bp1391927 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content40% 
IMG OID637786008 
ProductUDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 
Protein accessionYP_391545 
Protein GI78485620 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.764641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGTTAA AAAATATTGT AAATTACCTT AAAGAAGTTG GCATCGACGT CGAATTAAAA 
GGTGATGATT CTATTAATGT CGATCAGGTA TCTGGCCTGG TTGAAGCACA GCAAAATCAC 
ATCAGTTTTT TATCCGACTC CAAACGAATC CATGAGCTAG AGACAACCTC TGCTGGCGTC 
GTTTTAATTC ATCCAAAATT TGAAAGTTTA ACCACGACGA CGTGTTTATT GGTTGAGAAT 
CCATATTTTG CGTTTGCCAA GGTGTCTCAA TTACTTAATC CTGAAAATTT TCCGGCAGGC 
ATTCATGCTT CTGCCGTTGT GGATGACTCG GCCAAGATTG CAGAATCGGC GTGGATTGGT 
GAAAATGTCG TCATTGGAAA AAGAGTCACG ATAGGAGATA ATTGTTACAT TGGACCAGGG 
TCGGTGGTAT TGGATGATTC CGTTATTGGT CAAAAAACAC GTTTAGTTGC TAATGTAACG 
GTGATGCATA ATTGCATTAT CGGTGAAGAA GGTTACTTGG ACCCTGGTTG TGTCATTGGT 
GGTCAGGGCT TTGGCTTTGC CAATGAACAA GGTGAATGGC ATAAGATTCC ACAAATTGGC 
CGAGTTGTGA TTGGTGACCG AGTTTTTGTG GGTGTTAATG CAAACATCCA TCGCGGTGCA 
ATAAATGACA CTGTCATCGA GTCAAATTGT ATTATTGATA GCTTGGTTCA TATTGCTCAT 
AATGTTTCGA TTGGTTATGG TTCAGCAATT GCCAGCCAAG TTGGTTTTGC GGGCAGTACG 
GCTGTTGGAA AATATTGTGT TTTTGCAGGA CAGGCAGGCA TCAATGGTCA CATTTCCATT 
GCGGATAAAA GTTATTTTGC CGCTAAATCT GGTGTGACAC ATACCATTAA AGAGTCAGGA 
AGTTATTCAG GCTTCCCCGC AATTCCAACA CCTGAATGGC AAAAAAATAT GGTTCGGTCG 
AAAGGATTGA ATAAAATGGC TCAAAAGATA AAACACTTAG AAAAAGAACT ACAAGAATTA 
AAATCTAAAT TGGAAAATGA CTAA
 
Protein sequence
MKLKNIVNYL KEVGIDVELK GDDSINVDQV SGLVEAQQNH ISFLSDSKRI HELETTSAGV 
VLIHPKFESL TTTTCLLVEN PYFAFAKVSQ LLNPENFPAG IHASAVVDDS AKIAESAWIG 
ENVVIGKRVT IGDNCYIGPG SVVLDDSVIG QKTRLVANVT VMHNCIIGEE GYLDPGCVIG 
GQGFGFANEQ GEWHKIPQIG RVVIGDRVFV GVNANIHRGA INDTVIESNC IIDSLVHIAH 
NVSIGYGSAI ASQVGFAGST AVGKYCVFAG QAGINGHISI ADKSYFAAKS GVTHTIKESG 
SYSGFPAIPT PEWQKNMVRS KGLNKMAQKI KHLEKELQEL KSKLEND