Gene Tcr_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1272 
Symbol 
ID3761661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp1387863 
End bp1388486 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content43% 
IMG OID637786004 
Productribonuclease H 
Protein accessionYP_391541 
Protein GI78485616 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACC CTCAAATTCA CTTGGATTTG ATGCCGCATG GCATTGCTGA TGAATTCATT 
GTTGGGGTTG ATGAAGTTGG ACGCGGCCCT TTGGTAGGGG ATGTTGTTGC TGCAGCTGTT 
ATTTTGCCGA AAGGGTGCGA GCTTTTATTA AAAGACTCTA AAAAGCTATC AGAAAGCAAA 
AGAGAGCTTA TTGCGCATCA AATACAGCAA GAAGCCATTG ATTTTTGCAT TGCTACAGCT 
TCCCCGGATG AGATTGATTC TTTGAATATT CTCCATGCAA CCATGCTTGC CATGAAACGT 
GCGGTTGAAG GGCTTAATAA CCCTATCAAA AAAGTGTTAG TGGACGGAAA CCGTTGCCCG 
AATGTTCCTT ATGAATGCGA AGCAATCGTT AAGGGCGATG GCAAGGTACC TGTGATCAGT 
GCAGCGTCTA TTTTAGCCAA GGTGCATAGA GATCAACAAA TGCAGGTATT GCATGAAGCC 
TACCCTGAGT ATGGGTTTGA TGCCCATAAA GGCTATCCTA CCAAGCTGCA TTTAGAAAAA 
CTGTCACAAC ACGGCCTAAT CCCTGGGTAT CGTCGCTCTT TTAAACCGGT TAAAAATATT 
TTGCAGTTGT TGGAAAAGAT ATAG
 
Protein sequence
MTDPQIHLDL MPHGIADEFI VGVDEVGRGP LVGDVVAAAV ILPKGCELLL KDSKKLSESK 
RELIAHQIQQ EAIDFCIATA SPDEIDSLNI LHATMLAMKR AVEGLNNPIK KVLVDGNRCP 
NVPYECEAIV KGDGKVPVIS AASILAKVHR DQQMQVLHEA YPEYGFDAHK GYPTKLHLEK 
LSQHGLIPGY RRSFKPVKNI LQLLEKI