| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1269 |
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| Symbol | |
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| ID | 3761658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 1384405 |
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| End bp | 1386315 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637786001 |
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| Product | helicase c2 |
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| Protein accession | YP_391538 |
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| Protein GI | 78485613 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATTAA AAATACAAAT TCAGTCGATC CTCGGAAAAG ACGGGCAACT TTCTCAAAAC
ACTTCAGATT ATGAAGTGCG CCATGCTCAA GTGGAGATGG CCGAAACCGT TGCTGAGGTG
ATTGATGAAG ATCAAACTCT TTTGGCAGAA GCCGGTACTG GGACCGGGAA AACCTTTGCT
TATCTTATCC CCGCATTGTT ATCGGGTAAA AAAGTCATCG TATCGACCGC CACAAAGACA
TTACAAGATC AATTATTACG TAAAGACATT CCTCTTTTGA TGGATATTTG TAATGCGAAA
GGCACGGCCA AAATCCTGAA AGGGCGTGAA AATTATATTT GTCCCCAACG GTTAGAAATT
GCTGAAACTG CGGAACAAAA TACCAAGGAA GTGTGGCGAA AGTTATCGCT GATTCATGAT
TGGCAAGAAA AAACACTGAT CGGGGATAAA TCCGAGCTCA CCACGTTGGA TGAGAATGAT
CCTATATGGA GCCGGGTTTG CGCGCGTATG GAATTTTGCC AGGCAAATGA ATGCACTGGC
GATAATGGTT GTTTTTACCC CGGTGTAAAG CAACAAGCCA CAGATGCAGA AATATTAATC
GTGAATCATC ATTTGTTTTG CGCTGACTTA GCATTAAGAG AGCAGGGATT TGGTGAAATC
CTACCGGAAG CCGATATCTA TATTTTTGAT GAAGCGCACC AACTTCCTGA TATAGCGGCT
CAGTTTTTAG GGTTTAGTGT CAGTCGGTTT CAATTAGACG AATTGGTAAG AGATGTTCGT
TTAGCTTATA AAAAAGAATC TCCGGAAACC ATAGAACTAT CGGATCAGGC AAAAGCGGTG
GAAGATAAAA TCCGCATTTT TAATGAAGCA TTAGGGAAGT GGGAAAAACG TTGGACTTGG
GAAAGCTTTT CAGAAGCCAA AACCGGTCAT AAAACGCTTG AACACTTGCG GAATCAACTG
TCATTGTTGG CGGAGGTGAT TAAGCCGATT ACAGATCGAG GCAAATTATT ATCGGCTTTG
TATAAAAGAA CACAGGAATT TGAAAAACAG ATTGAGACTT GGTTAAAGGC CTCCTCAGAA
AATCAAATAC GATGGGTAGA ATCCTCGCAA GCACGATTTA AATTAAACCT GACGCCGCTA
AGTGTGGCCG CACCATTTAG TCGACAGCGT GACGCATTAG GCGGTGCCTG GATTTTTACT
TCAGCCACAC TCAGCGTGAA TCAAAGCTTT GATTATTTTG CCCATCGATT AGGGCTTGAA
TCAGCGCGCA CTCATCAATG GGAAAGCCCT TTTGATTATG AACAGCAAGC TGTTATTTAT
CATCCGATCG GCTTACCGGA CCCGAAACAT CCTGACTACA TTAAGATCTG CTTAAGGGCG
GCTTGGCCAT TGTTGCTTGC CAGCCAAGGA AGAGCGTTTT TATTGTTTAC CAGTCATAAG
GCCTTGCAAG AAGCTAAGGT TATTCTATCC CAGCACTGGG AAGGAACGCT GATGGTTCAA
GGCGACGGTC CTAAAACGAC GTTGCTTGCA CGTTTCAAGG AAACCGAGAA TGCTATTTTA
TTGGGTACCA GCAGTTTCTG GGAAGGTGTG GATGTGAAAG GCGATGCCTT AAAGCTGGTT
TTAATTGATC GAATTCCTTT TATTCCTCCC GACGACCCGG TTGTTCAAGC GAGAGAGTCC
TTTTTGAAGC AAAAAGGGCT GAGCGGTTTC TTTAATTTTC AAATTCCAGA AGCAACTATT
GCGCTTAAAC AAGGTGCCGG TAGGTTGATA AGAGATTCAT CCGATAAAGG GGTGTTGATG
TTATGTGATC CACGGTTGAC CCAAAAGCCG TATGGTAAAA TTATTACCAA TAGCTTTCCG
AGTTTTAAGT GGGTCTATGA TGTGAACGAA GCAAAAGAGA AATTACTATG A
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| Protein sequence | MSLKIQIQSI LGKDGQLSQN TSDYEVRHAQ VEMAETVAEV IDEDQTLLAE AGTGTGKTFA
YLIPALLSGK KVIVSTATKT LQDQLLRKDI PLLMDICNAK GTAKILKGRE NYICPQRLEI
AETAEQNTKE VWRKLSLIHD WQEKTLIGDK SELTTLDEND PIWSRVCARM EFCQANECTG
DNGCFYPGVK QQATDAEILI VNHHLFCADL ALREQGFGEI LPEADIYIFD EAHQLPDIAA
QFLGFSVSRF QLDELVRDVR LAYKKESPET IELSDQAKAV EDKIRIFNEA LGKWEKRWTW
ESFSEAKTGH KTLEHLRNQL SLLAEVIKPI TDRGKLLSAL YKRTQEFEKQ IETWLKASSE
NQIRWVESSQ ARFKLNLTPL SVAAPFSRQR DALGGAWIFT SATLSVNQSF DYFAHRLGLE
SARTHQWESP FDYEQQAVIY HPIGLPDPKH PDYIKICLRA AWPLLLASQG RAFLLFTSHK
ALQEAKVILS QHWEGTLMVQ GDGPKTTLLA RFKETENAIL LGTSSFWEGV DVKGDALKLV
LIDRIPFIPP DDPVVQARES FLKQKGLSGF FNFQIPEATI ALKQGAGRLI RDSSDKGVLM
LCDPRLTQKP YGKIITNSFP SFKWVYDVNE AKEKLL
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